RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	PHF20	Q9BVI0	1012 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	ZBP1	Q9H171	429 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	NRDE2	Q9H7Z3	1164 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	IFT122	Q9HBG6	1241 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	CYP26B1	Q9NR63	512 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	GJB4	Q9NTQ9	266 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	TBC1D13	Q9NVG8	400 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	INPP5F	Q9Y2H2	1132 aa		18.21	■□□□□ 0.51
TRIM65-203	ENST00000540812	USP34	Q70CQ2	3546 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	B4GALT3	O60512	393 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	OFD1	O75665	1012 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	QARS	P47897	775 aa	Known RBP	18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	PTPN21	Q16825	1174 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	NOMO2	Q5JPE7	1267 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	C12orf76	Q8N812	135 aa	Predicted RBP	18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	OXER1	Q8TDS5	423 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	ASIC4	Q96FT7	647 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	IGSF21	Q96ID5	467 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	INO80B	Q9C086	356 aa	Predicted RBP	18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	POMK	Q9H5K3	350 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	TSHZ2	Q9NRE2	1034 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	COL4A3BP	Q9Y5P4	624 aa		18.2	■□□□□ 0.5
TRIM65-203	ENST00000540812	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	CCDC194	A0A1B0GVG4	234 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	ZNF623	O75123	536 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	P4HB	P07237	508 aa	Known RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	GALT	P07902	379 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	WEE2	P0C1S8	567 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	TPRN	Q4KMQ1	711 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	EARS2	Q5JPH6	523 aa	Known RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	KANK3	Q6NY19	840 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	GLB1L	Q6UWU2	654 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	PIK3AP1	Q6ZUJ8	805 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	NEK8	Q86SG6	692 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	SUGP1	Q8IWZ8	645 aa	Known RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	FBXL6	Q8N531	539 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	HAS1	Q92839	578 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	TMEM143	Q96AN5	459 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	FAM20A	Q96MK3	541 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	PHOX2B	Q99453	314 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	JPH2	Q9BR39	696 aa	Predicted RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	SLK	Q9H2G2	1235 aa	Predicted RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	ADAM7	Q9H2U9	754 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	DHX33	Q9H6R0	707 aa	Known RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	MINDY3	Q9H8M7	445 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	DNAJB4	Q9UDY4	337 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	PCDHB2	Q9Y5E7	798 aa		18.19	■□□□□ 0.5
TRIM65-203	ENST00000540812	C2CD4D	B7Z1M9	353 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	CTSA	P10619	480 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	SKI	P12755	728 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	SLC11A1	P49279	550 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	VCP	P55072	806 aa	Known RBP	18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	RARS2	Q5T160	578 aa	Known RBP	18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	PPP4R3A	Q6IN85	833 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	AGMO	Q6ZNB7	445 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	DDX53	Q86TM3	631 aa	Known RBP	18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	ZNF280B	Q86YH2	543 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	FEZF2	Q8TBJ5	459 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	PRPF31	Q8WWY3	499 aa	Known RBP	18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	CEP170P1	Q96L14	293 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	VN1R3	Q9BXE9	311 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	GBP3	Q9H0R5	595 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	AGPAT5	Q9NUQ2	364 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	TPCN1	Q9ULQ1	816 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	CACNA1H	O95180	2353 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	STK36	Q9NRP7	1315 aa		18.18	■□□□□ 0.5
TRIM65-203	ENST00000540812	FAM205C	A6NFA0	338 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	CCNT1	O60563	726 aa	Known RBP	18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	SRGAP2C	P0DJJ0	459 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	EPCAM	P16422	314 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	RAB27A	P51159	221 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	AFF1	P51825	1210 aa	Known RBP	18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	POLG	P54098	1239 aa	Predicted RBP	18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	BMS1	Q14692	1282 aa	Known RBP	18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	EPHA7	Q15375	998 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	CES5A	Q6NT32	575 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	POTED	Q86YR6	584 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	SLC7A3	Q8WY07	619 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	LXN	Q9BS40	222 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	RGL1	Q9NZL6	768 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	NR2E1	Q9Y466	385 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	DMD	P11532	3685 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	MYO15A	Q9UKN7	3530 aa		18.17	■□□□□ 0.5
TRIM65-203	ENST00000540812	ZBTB39	O15060	712 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	PFKFB2	O60825	505 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	CDKL5	O76039	1030 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	CTDNEP1	O95476	244 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	PDGFB	P01127	241 aa	Predicted RBP	18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	GCFC2	P16383	781 aa	Known RBP	18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	HOXA11	P31270	313 aa	Predicted RBP	18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	RNASEL	Q05823	741 aa	Known RBP	18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	ITIH3	Q06033	890 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	LAMTOR4	Q0VGL1	99 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	TCF15	Q12870	199 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	UBXN11	Q5T124	520 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	ZBTB33	Q86T24	672 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	KREMEN2	Q8NCW0	462 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	SLC22A17	Q8WUG5	538 aa		18.16	■□□□□ 0.5
TRIM65-203	ENST00000540812	PSPC1	Q8WXF1	523 aa	Known RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms