RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 B4GALT3O60512 393 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 LAMTOR4Q0VGL1 99 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 EMC2Q15006 297 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 TMC7Q7Z402 723 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 AUTS2Q8WXX7 1259 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
MSRB3-209ENST00000540804 EIF2AK1Q9BQI3 630 aaKnown RBP16.18■□□□□ 0.18
MSRB3-209ENST00000540804 TMEM60Q9H2L4 133 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 XPNPEP1Q9NQW7 623 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
MSRB3-209ENST00000540804 LZTS1Q9Y250 596 aa16.18■□□□□ 0.18
MSRB3-209ENST00000540804 DKC1O60832 514 aaKnown RBP eCLIP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 ZC3H11AO75152 810 aaKnown RBP eCLIP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 OFD1O75665 1012 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 BAG4O95429 457 aaKnown RBP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 CA8P35219 290 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 TECP42680 631 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 TXKP42681 527 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 CDC42EP1Q00587 391 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 KCNC3Q14003 757 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 CALCRLQ16602 461 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 UBXN11Q5T124 520 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 RNF135Q8IUD6 432 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 CCDC83Q8IWF9 413 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 SLFN12Q8IYM2 578 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 PSPC1Q8WXF1 523 aaKnown RBP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 JPH2Q9BR39 696 aaPredicted RBP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 INO80BQ9C086 356 aaPredicted RBP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 NRDE2Q9H7Z3 1164 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 TTC12Q9H892 705 aaPredicted RBP16.17■□□□□ 0.18
MSRB3-209ENST00000540804 BRMS1Q9HCU9 246 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 AGPAT5Q9NUQ2 364 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 TBC1D13Q9NVG8 400 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 DNAJB4Q9UDY4 337 aa16.17■□□□□ 0.18
MSRB3-209ENST00000540804 ALADP13716 330 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 HOXA11P31270 313 aaPredicted RBP16.16■□□□□ 0.18
MSRB3-209ENST00000540804 RFC5P40937 340 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 KRT17Q04695 432 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 SYCE2Q6PIF2 218 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 AGMOQ6ZNB7 445 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 ZNF280BQ86YH2 543 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 FEZF2Q8TBJ5 459 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 PIGOQ8TEQ8 1089 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 HSD17B14Q9BPX1 270 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 TRAIPQ9BWF2 469 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 S1PR5Q9H228 398 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 PCDHB2Q9Y5E7 798 aa16.16■□□□□ 0.18
MSRB3-209ENST00000540804 C2orf71A6NGG8 1288 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 POTEMA6NI47 508 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 NEMFO60524 1076 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 DDHD2O94830 711 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 PPM1AP35813 382 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 SLC11A1P49279 550 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 TRIM29Q14134 588 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 NOMO2Q5JPE7 1267 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 PDE12Q6L8Q7 609 aaKnown RBP16.15■□□□□ 0.18
MSRB3-209ENST00000540804 ANKRD54Q6NXT1 300 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 KANK3Q6NY19 840 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 OTUD6AQ7L8S5 288 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 ASAP3Q8TDY4 903 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 CPB2Q96IY4 423 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 CDCA3Q99618 268 aaPredicted RBP16.15■□□□□ 0.18
MSRB3-209ENST00000540804 MTRQ99707 1265 aa16.15■□□□□ 0.18
MSRB3-209ENST00000540804 EIF2AQ9BY44 585 aaKnown RBP16.15■□□□□ 0.18
MSRB3-209ENST00000540804 MRPL9Q9BYD2 267 aaKnown RBP16.15■□□□□ 0.18
MSRB3-209ENST00000540804 NGRNQ9NPE2 291 aaKnown RBP16.15■□□□□ 0.18
MSRB3-209ENST00000540804 LOC730098B7Z3J9 87 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 CLASP2O75122 1294 aaKnown RBP16.14■□□□□ 0.17
MSRB3-209ENST00000540804 ZNF623O75123 536 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 CXCL14O95715 111 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 GALTP07902 379 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 SP100P23497 879 aaPredicted RBP16.14■□□□□ 0.17
MSRB3-209ENST00000540804 MCM7P33993 719 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 ALDH7A1P49419 539 aaKnown RBP16.14■□□□□ 0.17
MSRB3-209ENST00000540804 GLB1LQ6UWU2 654 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 SRGAP1Q7Z6B7 1085 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 MRPL43Q8N983 215 aaKnown RBP16.14■□□□□ 0.17
MSRB3-209ENST00000540804 TCP11Q8WWU5 503 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 SUSD6Q92537 303 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 POP1Q99575 1024 aaKnown RBP16.14■□□□□ 0.17
MSRB3-209ENST00000540804 VN1R3Q9BXE9 311 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 HES2Q9Y543 173 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 NCOR1O75376 2440 aa16.14■□□□□ 0.17
MSRB3-209ENST00000540804 PRR33A8MZF0 331 aa16.13■□□□□ 0.17
MSRB3-209ENST00000540804 TSPAN1O60635 241 aa16.13■□□□□ 0.17
MSRB3-209ENST00000540804 POMCP01189 267 aa16.13■□□□□ 0.17
MSRB3-209ENST00000540804 PLA2G5P39877 138 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms