RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 PHLDB3Q6NSJ2 640 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 VPS36Q86VN1 386 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 LRRC57Q8N9N7 239 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
LCOR-209ENST00000540664 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 ST7Q9NRC1 585 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 OTOFQ9HC10 1997 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 DDNO94850 711 aaPredicted RBP10.39□□□□□ -0.75
LCOR-209ENST00000540664 ZBTB48P10074 688 aaPredicted RBP10.39□□□□□ -0.75
LCOR-209ENST00000540664 ICAM3P32942 547 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 NPTX2P47972 431 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 PPP3CAQ08209 521 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 SMC1AQ14683 1233 aaKnown RBP10.39□□□□□ -0.75
LCOR-209ENST00000540664 KIF22Q14807 665 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 TERF2Q15554 542 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 FAM102BQ5T8I3 360 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 ABHD15Q6UXT9 468 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.39□□□□□ -0.75
LCOR-209ENST00000540664 OTUD6AQ7L8S5 288 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 SLFN11Q7Z7L1 901 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 PLEKHO2Q8TD55 490 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 KIFAP3Q92845 792 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 KCNN1Q92952 543 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 ATP6V0A1Q93050 837 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 CCDC43Q96MW1 224 aaKnown RBP10.39□□□□□ -0.75
LCOR-209ENST00000540664 PCIF1Q9H4Z3 704 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 SUGCTQ9HAC7 445 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 GABBR1Q9UBS5 961 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 TBX20Q9UMR3 447 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 SNCAIPQ9Y6H5 919 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 EMSYQ7Z589 1322 aa10.39□□□□□ -0.75
LCOR-209ENST00000540664 DOCK5Q9H7D0 1870 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 PSAPP07602 524 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 ADSSP30520 456 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 CXCR5P32302 372 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 NAP1L1P55209 391 aaKnown RBP10.38□□□□□ -0.75
LCOR-209ENST00000540664 ENPEPQ07075 957 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 IFI16Q16666 785 aaKnown RBP10.38□□□□□ -0.75
LCOR-209ENST00000540664 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 CHST13Q8NET6 341 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 FBXL18Q96ME1 805 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 JPH1Q9HDC5 661 aaPredicted RBP10.38□□□□□ -0.75
LCOR-209ENST00000540664 PRDM10Q9NQV6 1147 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 SLC9A2Q9UBY0 812 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 EXOC7Q9UPT5 735 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 PFASO15067 1338 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 IGSF9BQ9UPX0 1349 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 ATG7O95352 703 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 FTCDO95954 541 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 H2AFZP0C0S5 128 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 CCDC172P0C7W6 258 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 SMTNP53814 917 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 CASP8Q14790 479 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 CFAP221Q4G0U5 840 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 LBX2Q6XYB7 198 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 CCNI2Q6ZMN8 369 aaPredicted RBP10.38□□□□□ -0.75
LCOR-209ENST00000540664 H2AFVQ71UI9 128 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 DNERQ8NFT8 737 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 BSNDQ8WZ55 320 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 VIPAS39Q9H9C1 493 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 XPNPEP1Q9NQW7 623 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 TELO2Q9Y4R8 837 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 NCANO14594 1321 aa10.38□□□□□ -0.75
LCOR-209ENST00000540664 ANKRD63C9JTQ0 380 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 DGAT1O75907 488 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 ADRB2P07550 413 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 PAFAH1B1P43034 410 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 ACTR2P61160 394 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 CETN1Q12798 172 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 DMP1Q13316 513 aaPredicted RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 VGLL4Q14135 290 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 GNPTABQ3T906 1256 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 MAP9Q49MG5 647 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 GLE1Q53GS7 698 aaKnown RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 CCDC181Q5TID7 509 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 SLC39A4Q6P5W5 647 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 CCDC60Q8IWA6 550 aaPredicted RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 MCPH1Q8NEM0 835 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 TPCN2Q8NHX9 752 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 CEP170P1Q96L14 293 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 PSMB7Q99436 277 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 ADARB2Q9NS39 739 aaKnown RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 EHD2Q9NZN4 543 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 SIP14410 1827 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 DENND3A2RUS2 1198 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 H3BQF6 201 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 FOXN3O00409 490 aaPredicted RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 TMEM253P0C7T8 217 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 SUPT20HL2P0C7V6 817 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 TNFRSF8P28908 595 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 OAS2P29728 719 aaKnown RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 CNGA1P29973 690 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 SP2Q02086 613 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 PRKG1Q13976 671 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 SWSAP1Q6NVH7 229 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 U2AF1L4Q8WU68 220 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms