RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 NAMPTP43490 491 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 RBL2Q08999 1139 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 ALCAMQ13740 583 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 SYCP1Q15431 976 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 MAN2A1Q16706 1144 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 DCAF17Q5H9S7 520 aaPredicted RBP11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 TCERG1LQ5VWI1 586 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 IER5Q5VY09 327 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 FAM186BQ8IYM0 893 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 RAET1EQ8TD07 263 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 SAAL1Q96ER3 474 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 CRACR2AQ9BSW2 395 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 DMAC2Q9NW81 257 aa11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.34□□□□□ -0.59
PABPC1P4-201ENST00000539977 K7ERI5 159 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 FKTNO75072 461 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 DUSP11O75319 330 aaKnown RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 F2P00734 622 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 SMIM10L2AP0DMW4 78 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 SMIM10L2BP0DMW5 78 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 EPB41P11171 864 aaKnown RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 CPT1AP50416 773 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 ZNF200P98182 395 aaPredicted RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 TBX2Q13207 712 aaPredicted RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 HIC1Q14526 733 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 MFSD10Q14728 455 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 PPP2R5AQ15172 486 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 LRRC8AQ8IWT6 810 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 SLC17A8Q8NDX2 589 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 LMBR1Q8WVP7 490 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 ZBTB45Q96K62 511 aaPredicted RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 MMRN2Q9H8L6 949 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 HSPBP1Q9NZL4 362 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 IMPACTQ9P2X3 320 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 PYCARDQ9ULZ3 195 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 AKT3Q9Y243 479 aa11.33□□□□□ -0.6
PABPC1P4-201ENST00000539977 SEPT4O43236 478 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 GNA14O95837 355 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 RARBP10826 455 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 HOXD10P28358 340 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 CASP14P31944 242 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 PSEN2P49810 448 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 DNM2P50570 870 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 FXR1P51114 621 aaKnown RBP eCLIP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 APBA1Q02410 837 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 TMEM62Q0P6H9 643 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 STRN3Q13033 797 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 IRF5Q13568 498 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 HS1BP3Q53T59 392 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 CXCL17Q6UXB2 119 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 TCP11Q8WWU5 503 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 TARS2Q9BW92 718 aaKnown RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 MINDY3Q9H8M7 445 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 EXOC7Q9UPT5 735 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 GINS2Q9Y248 185 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 FRMD4BQ9Y2L6 1034 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 MYCP01106 439 aaPredicted RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 GYPCP04921 128 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 SFPQP23246 707 aaKnown RBP eCLIP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 LIG4P49917 911 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 MARSP56192 900 aaKnown RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 MXD4Q14582 209 aaPredicted RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 FKBP15Q5T1M5 1219 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 FRMD5Q7Z6J6 570 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 CBWD2Q8IUF1 395 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 POMGNT1Q8WZA1 660 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 BORCS6Q96GS4 357 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 JPH2Q9BR39 696 aaPredicted RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 XPNPEP3Q9NQH7 507 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 FAM207AQ9NSI2 230 aaPredicted RBP11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 Q9Y3F1 56 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 PPME1Q9Y570 386 aa11.32□□□□□ -0.6
PABPC1P4-201ENST00000539977 A0A087WZ62 844 aa11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 EPHB6O15197 1021 aa11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 SLC16A3O15427 465 aaKnown RBP11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 B4GALT5O43286 388 aa11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 HMGCRP04035 888 aa11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 GSDMDP57764 484 aa11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 DLG4P78352 724 aa11.31□□□□□ -0.6
PABPC1P4-201ENST00000539977 NFIL3Q16649 462 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms