RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.26
SNHG1-212ENST00000539975 NME8Q8N427 588 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 IGSF22Q8N9C0 903 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 TCP11Q8WWU5 503 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 PYM1Q9BRP8 204 aaKnown RBP7.21□□□□□ -1.26
SNHG1-212ENST00000539975 POLR3CQ9BUI4 534 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-212ENST00000539975 TRPV6Q9H1D0 765 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 SUGCTQ9HAC7 445 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 ANKEF1Q9NU02 776 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 TRMT13Q9NUP7 481 aaKnown RBP7.21□□□□□ -1.26
SNHG1-212ENST00000539975 FAM13BQ9NYF5 915 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 RGL1Q9NZL6 768 aa7.21□□□□□ -1.26
SNHG1-212ENST00000539975 SRPRBQ9Y5M8 271 aaKnown RBP7.21□□□□□ -1.26
SNHG1-212ENST00000539975 ZNFX1Q9P2E3 1918 aaKnown RBP7.21□□□□□ -1.26
SNHG1-212ENST00000539975 EML1O00423 815 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 ATP9BO43861 1147 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 GAS2O43903 313 aaKnown RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 CUTAO60888 179 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 CAND2O75155 1236 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 TIMP1P01033 207 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 SSBP05455 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 KRT18P05783 430 aaKnown RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 ACTN1P12814 892 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 KLRC1P26715 233 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 NASPP49321 788 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 PTSQ03393 145 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 DNM1Q05193 864 aaKnown RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 NCBP1Q09161 790 aaKnown RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 WDR44Q5JSH3 913 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 GDF6Q6KF10 455 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 EFCAB12Q6NXP0 572 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 MTHFD1LQ6UB35 978 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 B3GNT9Q6UX72 402 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 CCDC73Q6ZRK6 1079 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 CABP7Q86V35 215 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 CATSPER3Q86XQ3 398 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 C4orf32Q8N8J7 132 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 LMBR1Q8WVP7 490 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 IRF7Q92985 503 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 GLMNQ92990 594 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 USP28Q96RU2 1077 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 PCYT2Q99447 389 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 HSD17B14Q9BPX1 270 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 NIFKQ9BYG3 293 aaKnown RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 PPP1R12CQ9BZL4 782 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 GRIP2Q9C0E4 1043 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 LRRC27Q9C0I9 530 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 FAM49AQ9H0Q0 323 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 MTIF3Q9H2K0 278 aaKnown RBP7.2□□□□□ -1.26
SNHG1-212ENST00000539975 CYP26B1Q9NR63 512 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 KCNG1Q9UIX4 513 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 KIAA1024Q9UPX6 916 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 AKT3Q9Y243 479 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 PCDHA2Q9Y5H9 948 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 IGSF9BQ9UPX0 1349 aa7.2□□□□□ -1.26
SNHG1-212ENST00000539975 DOCK3Q8IZD9 2030 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 SMIM35A0A1B0GVV1 85 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 SLC35F4A4IF30 521 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 RSPH10B2B2RC85 870 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 KIAA0355O15063 1070 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 ASAP2O43150 1006 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 TREHO43280 583 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 LYPLA2O95372 231 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 CD4P01730 458 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 RSPH10BP0C881 870 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 SELPP16109 830 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 SYN1P17600 705 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 RFC2P35250 354 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 AMPD3Q01432 767 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 FPGSQ05932 587 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 PPIGQ13427 754 aaKnown RBP eCLIP7.19□□□□□ -1.26
SNHG1-212ENST00000539975 PKP1Q13835 747 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 TFDP1Q14186 410 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 RRAGBQ5VZM2 374 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 MFSD5Q6N075 450 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 SERINC5Q86VE9 423 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 LINC00301Q8NCQ3 95 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 MCPH1Q8NEM0 835 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 PIGOQ8TEQ8 1089 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 PPP1R13LQ8WUF5 828 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 INO80BQ9C086 356 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-212ENST00000539975 FTOQ9C0B1 505 aaKnown RBP eCLIP7.19□□□□□ -1.26
SNHG1-212ENST00000539975 CSRNP2Q9H175 543 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 DDX19AQ9NUU7 478 aaKnown RBP7.19□□□□□ -1.26
SNHG1-212ENST00000539975 DBR1Q9UK59 544 aaKnown RBP7.19□□□□□ -1.26
SNHG1-212ENST00000539975 ZMYND8Q9ULU4 1186 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-212ENST00000539975 GINS2Q9Y248 185 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 TELO2Q9Y4R8 837 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 GRIN2DO15399 1336 aa7.19□□□□□ -1.26
SNHG1-212ENST00000539975 MBLAC1A4D2B0 266 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-212ENST00000539975 ZNF862O60290 1169 aa7.18□□□□□ -1.26
SNHG1-212ENST00000539975 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-212ENST00000539975 MED24O75448 989 aa7.18□□□□□ -1.26
SNHG1-212ENST00000539975 IL2RAP01589 272 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms