RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ASAP2O43150 1006 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 MED24O75448 989 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDB1-215ENST00000539712 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDB1-215ENST00000539712 ARL2P36404 184 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 TOB1P50616 345 aaPredicted RBP18.7■□□□□ 0.58
DDB1-215ENST00000539712 UBXN11Q5T124 520 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 TWF2Q6IBS0 349 aaKnown RBP18.7■□□□□ 0.58
DDB1-215ENST00000539712 CATSPER3Q86XQ3 398 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 LRRC43Q8N309 656 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 RNF149Q8NC42 400 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 ASAP3Q8TDY4 903 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 TCP11Q8WWU5 503 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 FAM105AQ9NUU6 356 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 CLEC1BQ9P126 229 aa18.7■□□□□ 0.58
DDB1-215ENST00000539712 GLP2RO95838 553 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 TECP42680 631 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 PTENP60484 403 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 ORC2Q13416 577 aaPredicted RBP18.69■□□□□ 0.58
DDB1-215ENST00000539712 NBR1Q14596 966 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 CSPP1Q1MSJ5 1256 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 PUS10Q3MIT2 529 aaKnown RBP18.69■□□□□ 0.58
DDB1-215ENST00000539712 LONRF3Q496Y0 759 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 EP400NLQ6ZTU2 488 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 MRPL10Q7Z7H8 261 aaKnown RBP18.69■□□□□ 0.58
DDB1-215ENST00000539712 IFNLR1Q8IU57 520 aaPredicted RBP18.69■□□□□ 0.58
DDB1-215ENST00000539712 THNSL1Q8IYQ7 743 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 ABI1Q8IZP0 508 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 EFHBQ8N7U6 833 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 MSLNLQ96KJ4 702 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 MTRQ99707 1265 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 TLR9Q9NR96 1032 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 LZTS1Q9Y250 596 aa18.69■□□□□ 0.58
DDB1-215ENST00000539712 OFD1O75665 1012 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 DGAT1O75907 488 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 NRIP1P48552 1158 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
DDB1-215ENST00000539712 POU5F1BQ06416 359 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 TTC38Q5R3I4 469 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 RBM23Q86U06 439 aaKnown RBP18.68■□□□□ 0.58
DDB1-215ENST00000539712 SLC39A11Q8N1S5 342 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 FAM184AQ8NB25 1140 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 VN1R2Q8NFZ6 395 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 MRPS27Q92552 414 aaKnown RBP18.68■□□□□ 0.58
DDB1-215ENST00000539712 ZNF558Q96NG5 402 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 POLR3CQ9BUI4 534 aaPredicted RBP18.68■□□□□ 0.58
DDB1-215ENST00000539712 TUFT1Q9NNX1 390 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 PCDHB2Q9Y5E7 798 aa18.68■□□□□ 0.58
DDB1-215ENST00000539712 PER2O15055 1255 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 B4GALT3O60512 393 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 SKIP12755 728 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 GLRA2P23416 452 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 RBM10P98175 930 aaKnown RBP18.67■□□□□ 0.58
DDB1-215ENST00000539712 CAPSQ13938 189 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 MXD4Q14582 209 aaPredicted RBP18.67■□□□□ 0.58
DDB1-215ENST00000539712 CLUL1Q15846 466 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 AMHR2Q16671 573 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 AGMOQ6ZNB7 445 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 TMX3Q96JJ7 454 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 EPHX3Q9H6B9 360 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 SPG21Q9NZD8 308 aa18.67■□□□□ 0.58
DDB1-215ENST00000539712 TSPAN1O60635 241 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 RPA1P27694 616 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 RAB27AP51159 221 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 BCAR1P56945 870 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 MBTD1Q05BQ5 628 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 KCNC3Q14003 757 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 ECM1Q16610 540 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 TMEM173Q86WV6 379 aaPredicted RBP18.66■□□□□ 0.58
DDB1-215ENST00000539712 MICAL1Q8TDZ2 1067 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 TLE6Q9H808 572 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 GPRC5CQ9NQ84 441 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 TBC1D13Q9NVG8 400 aa18.66■□□□□ 0.58
DDB1-215ENST00000539712 DBR1Q9UK59 544 aaKnown RBP18.66■□□□□ 0.58
DDB1-215ENST00000539712 HIDE1A8MVS5 230 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 NT5C1B-RDH14C9J2C7 533 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 MBTPS2O43462 519 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 EYA4O95677 639 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 PPM1AP35813 382 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 ZP2Q05996 745 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 SMAD2Q15796 467 aaKnown RBP18.65■□□□□ 0.58
DDB1-215ENST00000539712 DUSP6Q16828 381 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 NOMO2Q5JPE7 1267 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 PDE12Q6L8Q7 609 aaKnown RBP18.65■□□□□ 0.58
DDB1-215ENST00000539712 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 GJD3Q8N144 294 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 SMG8Q8ND04 991 aaKnown RBP18.65■□□□□ 0.58
DDB1-215ENST00000539712 BCL7CQ8WUZ0 217 aaPredicted RBP18.65■□□□□ 0.58
DDB1-215ENST00000539712 PPP2R3CQ969Q6 453 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 NACC1Q96RE7 527 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 MRPL9Q9BYD2 267 aaKnown RBP18.65■□□□□ 0.58
DDB1-215ENST00000539712 NFKBIZQ9BYH8 718 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 NRDE2Q9H7Z3 1164 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 PCDHB6Q9Y5E3 794 aa18.65■□□□□ 0.58
DDB1-215ENST00000539712 C19orf67A6NJJ6 358 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 ST18O60284 1047 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms