RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
HMGA2-209ENST00000539662 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 PIN4Q9Y237 131 aaKnown RBP11.89□□□□□ -0.51
HMGA2-209ENST00000539662 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
HMGA2-209ENST00000539662 TBKBP1A7MCY6 615 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 SFI1A8K8P3 1242 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 INO80B-WBP1J3KQ70 363 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 GAS2O43903 313 aaKnown RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 TSPAN1O60635 241 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 ZSCAN20P17040 1043 aaPredicted RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 MUTP22033 750 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 SFPQP23246 707 aaKnown RBP eCLIP11.88□□□□□ -0.514e-8■■□□□ 11.9
HMGA2-209ENST00000539662 AFF1P51825 1210 aaKnown RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 CDC42EP1Q00587 391 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 ARSHQ5FYA8 562 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 C1orf186Q6ZWK4 172 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 TMEM192Q8IY95 271 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 EXOC8Q8IYI6 725 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 FIBCD1Q8N539 461 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 MAFAQ8NHW3 353 aaPredicted RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 EIF2AQ9BY44 585 aaKnown RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 RAB34Q9BZG1 259 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 INO80BQ9C086 356 aaPredicted RBP11.88□□□□□ -0.51
HMGA2-209ENST00000539662 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 BLOC1S4Q9NUP1 217 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 TMEM161AQ9NX61 479 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 LRFN2Q9ULH4 789 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 DNM3Q9UQ16 869 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 PLXNA4Q9HCM2 1894 aa11.88□□□□□ -0.51
HMGA2-209ENST00000539662 A0A087X0B3 334 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 A0A0U1RQF3 1178 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 ASAP2O43150 1006 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 HIP1RO75146 1068 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 CSPG5O95196 566 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 F13A1P00488 732 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 STAG3L1P0CL83 205 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 PLCG1P19174 1290 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 PBX3P40426 434 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 PHKA2P46019 1235 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 SLC12A3P55017 1021 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 DHX8Q14562 1220 aaKnown RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 MXD4Q14582 209 aaPredicted RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 ODR4Q5SWX8 454 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 TWF2Q6IBS0 349 aaKnown RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 MCPH1Q8NEM0 835 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 FBXO22Q8NEZ5 403 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 HELQQ8TDG4 1101 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 CLP1Q92989 425 aaKnown RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 GAS2L1Q99501 681 aaPredicted RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 CWH43Q9H720 699 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 FAM105AQ9NUU6 356 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 SRPRBQ9Y5M8 271 aaKnown RBP11.87□□□□□ -0.51
HMGA2-209ENST00000539662 XIRP2A4UGR9 3374 aa11.87□□□□□ -0.51
HMGA2-209ENST00000539662 MYO7AQ13402 2215 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 GRM6O15303 877 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 B4GALT3O60512 393 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 PLA2G4BP0C869 781 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 ARF4P18085 180 aaPredicted RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 LIG1P18858 919 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 DNAJB1P25685 340 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 CTNNB1P35222 781 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 LONP1P36776 959 aaKnown RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 BMPR1AP36894 532 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 UBA7P41226 1012 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 TFDP1Q14186 410 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 MCM6Q14566 821 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 CDCA2Q69YH5 1023 aaPredicted RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 AGMOQ6ZNB7 445 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 CMTR2Q8IYT2 770 aaKnown RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 SYT2Q8N9I0 419 aaPredicted RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 LINC00301Q8NCQ3 95 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 SMG8Q8ND04 991 aaKnown RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 AK8Q96MA6 479 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 PANK2Q9BZ23 570 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 CCDC113Q9H0I3 377 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 CXCL16Q9H2A7 254 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 ELAC1Q9H777 363 aaKnown RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
HMGA2-209ENST00000539662 CHST12Q9NRB3 414 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 HES2Q9Y543 173 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 PCDHB2Q9Y5E7 798 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 MYH11P35749 1972 aa11.86□□□□□ -0.51
HMGA2-209ENST00000539662 H3BNC9 293 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 BRD1O95696 1058 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms