RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HS2ST1Q7LGA3 356 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 CTAGE6Q86UF2 777 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 CTAGE4Q8IX94 777 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 DHX37Q8IY37 1157 aaKnown RBP18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 GPR20Q99678 358 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 RHOXF2Q9BQY4 288 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 ARMCX3Q9UH62 379 aaPredicted RBP18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 CAPN11Q9UMQ6 739 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 NCKAP1LP55160 1127 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 VSNL1P62760 191 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 GTF2BQ00403 316 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 FRMD5Q7Z6J6 570 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 DPP9Q86TI2 863 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 GOLGA5Q8TBA6 731 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 SUGCTQ9HAC7 445 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 ATP6V0A4Q9HBG4 840 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 VPS18Q9P253 973 aa18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 LUC7L2Q9Y383 392 aaKnown RBP18.64■□□□□ 0.58
PCDHB17P-201ENST00000539533 EPHB6O15197 1021 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 CYP2J2P51589 502 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 KCNMA1Q12791 1236 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 TTLL4Q14679 1199 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 TRIM50Q86XT4 487 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 KIFAP3Q92845 792 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 SPATA33Q96N06 139 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 MMRN2Q9H8L6 949 aa18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 FAM207AQ9NSI2 230 aaPredicted RBP18.64■□□□□ 0.57
PCDHB17P-201ENST00000539533 MANSC4A6NHS7 340 aaPredicted RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 NOP56O00567 594 aaKnown RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 KCNH2Q12809 1159 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 DMP1Q13316 513 aaPredicted RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 ALCAMQ13740 583 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 GRB14Q14449 540 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 NFIL3Q16649 462 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 GJC2Q5T442 439 aaPredicted RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 FAM160B1Q5W0V3 765 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 TAPT1Q6NXT6 567 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 PLEKHH3Q7Z736 793 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 TMEM161BQ8NDZ6 487 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 AFAP1L1Q8TED9 768 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 SCFD2Q8WU76 684 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 ACCSQ96QU6 501 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 NUP58Q9BVL2 599 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 NIFKQ9BYG3 293 aaKnown RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 ST6GALNAC4Q9H4F1 302 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 DMAC2Q9NW81 257 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 PASKQ96RG2 1323 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 PCNTO95613 3336 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 EPB41P11171 864 aaKnown RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 POLGP54098 1239 aaPredicted RBP18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 CEP89Q96ST8 783 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 CRACR2AQ9BSW2 395 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 TMEM206Q9H813 350 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 KMT5AQ9NQR1 393 aa18.63■□□□□ 0.57
PCDHB17P-201ENST00000539533 SLC16A3O15427 465 aaKnown RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 MARK3P27448 753 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 MAPK4P31152 587 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 SMTNP53814 917 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 EMC2Q15006 297 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 TAF1CQ15572 869 aaPredicted RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 RETREG2Q8NC44 543 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 OR8K1Q8NGG5 319 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 GLG1Q92896 1179 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 TMEM143Q96AN5 459 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 BORCS6Q96GS4 357 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 NTPCRQ9BSD7 190 aaKnown RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 POLR3FQ9H1D9 316 aaPredicted RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 AZI2Q9H6S1 392 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 FAM184BQ9ULE4 1060 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 DIS3Q9Y2L1 958 aaKnown RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 N4BP1O75113 896 aaKnown RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 SNAI1O95863 264 aaPredicted RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 TUBBP07437 444 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 ACTN2P35609 894 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 AMPD2Q01433 879 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 ADGRA3Q8IWK6 1321 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 PCIF1Q9H4Z3 704 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 DHX33Q9H6R0 707 aaKnown RBP18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 NRBP2Q9NSY0 501 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
PCDHB17P-201ENST00000539533 ADGRA2Q96PE1 1338 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 CASP8Q14790 479 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 FIGNQ5HY92 759 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 FAM186BQ8IYM0 893 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 NOA1Q8NC60 698 aaKnown RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 NPLOC4Q8TAT6 608 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 MAML3Q96JK9 1138 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 DNAJC7Q99615 494 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 CHP1Q99653 195 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 C17orf75Q9HAS0 396 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 METTL14Q9HCE5 456 aaKnown RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 TARBP2Q15633 366 aaKnown RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 TCERG1LQ5VWI1 586 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 MAMDC4Q6UXC1 1216 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms