RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 GNEQ9Y223 722 aaKnown RBP9.69□□□□□ -0.86
DDB1-213ENST00000539332 EMSYQ7Z589 1322 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 USP27XA6NNY8 438 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SFI1A8K8P3 1242 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 AKR1B15C9JRZ8 316 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 SLC16A3O15427 465 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 CALUO43852 315 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 ADCY3O60266 1144 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 STX10O60499 249 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 LGR5O75473 907 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 STAT5BP51692 787 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 CLCN6P51797 869 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 NCKAP1LP55160 1127 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 ETF1P62495 437 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 KCNA1Q09470 495 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 TRIM32Q13049 653 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 MYBPC2Q14324 1141 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 VWA3BQ502W6 1294 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 ARHGAP29Q52LW3 1261 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 XKR9Q5GH70 373 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 FAM160B1Q5W0V3 765 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 TRMT1LQ7Z2T5 733 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 TRIM50Q86XT4 487 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SLC9A9Q8IVB4 645 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SLC17A8Q8NDX2 589 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 MNS1Q8NEH6 495 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 LENG1Q96BZ8 264 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 IQCDQ96DY2 449 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 NOC4LQ9BVI4 516 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 NIFKQ9BYG3 293 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 AZI2Q9H6S1 392 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 PSD3Q9NYI0 1048 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 DNAI1Q9UI46 699 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 FAM184BQ9ULE4 1060 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SIK3Q9Y2K2 1263 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 PCDHB13Q9Y5F0 798 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 ERICH4A6NGS2 130 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 CETN3O15182 167 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 ZSCAN12O43309 604 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 PPFIA4O75335 1185 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 DGAT1O75907 488 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 HMGCRP04035 888 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 NR3C1P04150 777 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 OATP04181 439 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 HOXD8P13378 290 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 AKR1A1P14550 325 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 NR2F2P24468 414 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 FXR1P51114 621 aaKnown RBP eCLIP9.68□□□□□ -0.865e-7■■■□□ 17.5
DDB1-213ENST00000539332 TUBB4BP68371 445 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 GTF2BQ00403 316 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 CACNB2Q08289 660 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 RBL2Q08999 1139 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 TARBP2Q15633 366 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 FRMD5Q7Z6J6 570 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 TLK2Q86UE8 772 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 CNGA4Q8IV77 575 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 C12orf56Q8IXR9 622 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 EXOC8Q8IYI6 725 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 MCPH1Q8NEM0 835 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 OR6J1Q8NGC5 347 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 KIFAP3Q92845 792 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 GLG1Q92896 1179 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 HVCN1Q96D96 273 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 BORCS6Q96GS4 357 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SH2D3AQ9BRG2 576 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 MKNK1Q9BUB5 465 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 NDST4Q9H3R1 872 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 DHX33Q9H6R0 707 aaKnown RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 POLD4Q9HCU8 107 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 XPNPEP1Q9NQW7 623 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 CYP26B1Q9NR63 512 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 SEPT9Q9UHD8 586 aaPredicted RBP9.68□□□□□ -0.86
DDB1-213ENST00000539332 PPME1Q9Y570 386 aa9.68□□□□□ -0.86
DDB1-213ENST00000539332 ARHGAP6O43182 974 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 DYNC1LI2O43237 492 aaPredicted RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 MMP3P08254 477 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 PRMT2P55345 433 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 HNRNPH2P55795 449 aaKnown RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 SNRPFP62306 86 aaKnown RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 GOLGA8FQ08AF8 430 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 GOLGA8DPQ0D2H9 430 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 TBC1D8BQ0IIM8 1120 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 ADAM9Q13443 819 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 ZC2HC1CQ53FD0 456 aaPredicted RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 MAP3K21Q5TCX8 1036 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 PLPPR4Q7Z2D5 763 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 PPFIBP1Q86W92 1011 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 GOLGA5Q8TBA6 731 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 CCDC43Q96MW1 224 aaKnown RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 NTPCRQ9BSD7 190 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms