RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 CWF19L1Q69YN2 538 aaKnown RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 ALKBH2Q6NS38 261 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 ZNF571Q7Z3V5 609 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 SPATA21Q7Z572 469 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 ZFAND2BQ8WV99 257 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 DDX12PQ92771 950 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 TRIM51Q9BSJ1 452 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 SEZ6LQ9BYH1 1024 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 TRIM31Q9BZY9 425 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CARD9Q9H257 536 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 PAPOLBQ9NRJ5 636 aaKnown RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 ATP8A2Q9NTI2 1148 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 STK38LQ9Y2H1 464 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 NUP98P52948 1817 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 PODXLO00592 558 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 RASGRF2O14827 1237 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 SMIM24O75264 130 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 NPTXRO95502 500 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 IFNAR2P48551 515 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 RAB27AP51159 221 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 IFI35P80217 286 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-209ENST00000538654 MTA1Q13330 715 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 SLC29A2Q14542 456 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 SGSM1Q2NKQ1 1148 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 PARP6Q2NL67 630 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 SBK1Q52WX2 424 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 SPICE1Q8N0Z3 855 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 PRCCQ92733 491 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-209ENST00000538654 GRAMD1AQ96CP6 724 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 FAM210AQ96ND0 272 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 NAP1L4Q99733 375 aaKnown RBP9.72□□□□□ -0.85
SNHG1-209ENST00000538654 CD2APQ9Y5K6 639 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 COL1A1P02452 1464 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-209ENST00000538654 ERVV-1B6SEH8 477 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 FAM200BP0CF97 657 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 GCLCP48506 637 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-209ENST00000538654 PLTPP55058 493 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 DYNLL1P63167 89 aaKnown RBP9.72□□□□□ -0.85
SNHG1-209ENST00000538654 MXRA7P84157 204 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 FAM26FQ5R3K3 315 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 CFAP61Q8NHU2 1237 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 PNMA5Q96PV4 448 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 OSBPL2Q9H1P3 480 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 GOLPH3Q9H4A6 298 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 LRRC4CQ9HCJ2 640 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 KLHL14Q9P2G3 628 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 NENFQ9UMX5 172 aa9.72□□□□□ -0.85
SNHG1-209ENST00000538654 ZNF804BA4D1E1 1349 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 TCP11X1B4DZS4 312 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 RTN3O95197 1032 aaPredicted RBP9.71□□□□□ -0.85
SNHG1-209ENST00000538654 TXKP42681 527 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 NAPAP54920 295 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 COASYQ13057 564 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 MAPK7Q13164 816 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 CALCRLQ16602 461 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 EDRF1Q3B7T1 1238 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 THEMIS2Q5TEJ8 643 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 SOGA3Q5TF21 947 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 RNF43Q68DV7 783 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 ANKRD23Q86SG2 305 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 DNAJC10Q8IXB1 793 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 MAD2L2Q9UI95 211 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 LZTS1Q9Y250 596 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.85
SNHG1-209ENST00000538654 SMIM23A6NLE4 172 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 KIAA0391O15091 583 aaKnown RBP9.71□□□□□ -0.86
SNHG1-209ENST00000538654 CETN3O15182 167 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 AP1G2O75843 785 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 UCHL3P15374 230 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 ATP6V1C1P21283 382 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 CALB2P22676 271 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 CHRNA3P32297 505 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 PCK1P35558 622 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 JAMLQ86YT9 394 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 CCDC65Q8IXS2 484 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 ZC3H3Q8IXZ2 948 aaKnown RBP9.71□□□□□ -0.86
SNHG1-209ENST00000538654 AGGF1Q8N302 714 aaeCLIP9.71□□□□□ -0.86
SNHG1-209ENST00000538654 SH3TC2Q8TF17 1288 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 FAM167BQ9BTA0 163 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 CCDC113Q9H0I3 377 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 VCXQ9H320 206 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 RNPEPL1Q9HAU8 725 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 USP40Q9NVE5 1235 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 FGFR1OP2Q9NVK5 253 aa9.71□□□□□ -0.86
SNHG1-209ENST00000538654 ZNF142P52746 1687 aaPredicted RBP9.71□□□□□ -0.86
SNHG1-209ENST00000538654 hCG_1984214I3L0E3 225 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
SNHG1-209ENST00000538654 UNC5CO95185 931 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 RARGP13631 454 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 GNAZP19086 355 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 VAMP1P23763 118 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 CDC25CP30307 473 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 GPSM2P81274 684 aa9.7□□□□□ -0.86
SNHG1-209ENST00000538654 ACVR2BQ13705 512 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms