RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 COL4A3BPQ9Y5P4 624 aa9.68□□□□□ -0.86
DDB1-212ENST00000538470 ZDBF2Q9HCK1 2354 aa9.68□□□□□ -0.86
DDB1-212ENST00000538470 CNTNAP2Q9UHC6 1331 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 EML1O00423 815 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 PER2O15055 1255 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 ASAP2O43150 1006 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 MARCH6O60337 910 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 ZNF623O75123 536 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 BAG4O95429 457 aaKnown RBP9.67□□□□□ -0.86
DDB1-212ENST00000538470 KRT2P35908 639 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 GIT2Q14161 759 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 PCBP1Q15365 356 aaKnown RBP eCLIP9.67□□□□□ -0.862e-20■■■□□ 16.1
DDB1-212ENST00000538470 TPRNQ4KMQ1 711 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 ANKRD54Q6NXT1 300 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 TMC7Q7Z402 723 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 POTEDQ86YR6 584 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 EDAQ92838 391 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 GTF3C6Q969F1 213 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 TMEM169Q96HH4 297 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 MFSD14AQ96MC6 490 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 ZSWIM4Q9H7M6 989 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 FAM105AQ9NUU6 356 aa9.67□□□□□ -0.86
DDB1-212ENST00000538470 C2orf71A6NGG8 1288 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 HIDE1A8MVS5 230 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 ZC3H11AO75152 810 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-212ENST00000538470 CTDNEP1O95476 244 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 YWHABP31946 246 aaKnown RBP9.66□□□□□ -0.86
DDB1-212ENST00000538470 PBX3P40426 434 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 TECP42680 631 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 AK2P54819 239 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 BCAR1P56945 870 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 SPIRE1Q08AE8 756 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 EMC2Q15006 297 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 NOMO2Q5JPE7 1267 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 BMP8AQ7Z5Y6 402 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 URGCPQ8TCY9 931 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 HAS1Q92839 578 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 TNFRSF25Q93038 417 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 CCDC51Q96ER9 411 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 NECTIN4Q96NY8 510 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 MTRQ99707 1265 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 SH2D3AQ9BRG2 576 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 ZBP1Q9H171 429 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 S1PR5Q9H228 398 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 DZANK1Q9NVP4 752 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 WRAP73Q9P2S5 460 aaPredicted RBP9.66□□□□□ -0.86
DDB1-212ENST00000538470 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 IRAK3Q9Y616 596 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 TRIOO75962 3097 aa9.66□□□□□ -0.86
DDB1-212ENST00000538470 ZMYM2Q9UBW7 1377 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 C2orf16Q68DN1 1984 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 NEMFO60524 1076 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 CSDE1O75534 798 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 LYPLA2O95372 231 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 CTSAP10619 480 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 AXLP30530 894 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 NPEPPSP55786 919 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 RBM10P98175 930 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 RNASELQ05823 741 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 ITIH3Q06033 890 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 LAMTOR4Q0VGL1 99 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 MXD4Q14582 209 aaPredicted RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 SYCE2Q6PIF2 218 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 HFE2Q6ZVN8 426 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 FERMT3Q86UX7 667 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 KSR1Q8IVT5 923 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 MRPL43Q8N983 215 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 CNNM3Q8NE01 707 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 NSUN7Q8NE18 718 aaKnown RBP9.65□□□□□ -0.86
DDB1-212ENST00000538470 IGSF21Q96ID5 467 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 TMEM175Q9BSA9 504 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 RSAD1Q9HA92 442 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 UBN1Q9NPG3 1134 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 TBC1D13Q9NVG8 400 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 NR2E1Q9Y466 385 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 PCDHB2Q9Y5E7 798 aa9.65□□□□□ -0.86
DDB1-212ENST00000538470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 CLASP2O75122 1294 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 OFD1O75665 1012 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 ERLIN2O94905 339 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 GALTP07902 379 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 FDPSP14324 419 aaKnown RBP9.64□□□□□ -0.87
DDB1-212ENST00000538470 MTHFRP42898 656 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 ZXDAP98168 799 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 CYP4A11Q02928 519 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 POU5F1BQ06416 359 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 SIGLEC14Q08ET2 396 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 NR5A1Q13285 461 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 TRIM29Q14134 588 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 TFDP1Q14186 410 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 CALCRLQ16602 461 aa9.64□□□□□ -0.87
DDB1-212ENST00000538470 XKR9Q5GH70 373 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms