RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 NFRKBQ6P4R8 1299 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 EMBQ6PCB8 327 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 CATSPERGQ6ZRH7 1159 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 ZNF771Q7L3S4 317 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 ENOSF1Q7L5Y1 443 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 EIF1ADQ8N9N8 165 aaKnown RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 TMC2Q8TDI7 906 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 RFFLQ8WZ73 363 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 KLRG1Q96E93 195 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 NAP1L3Q99457 506 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 TLR10Q9BXR5 811 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 EPC1Q9H2F5 836 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 KIAA1586Q9HCI6 787 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 JPH1Q9HDC5 661 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 GPRC5DQ9NZD1 345 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 HSPBP1Q9NZL4 362 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 PKD2L1Q9P0L9 805 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 STIM2Q9P246 746 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 SUCLA2Q9P2R7 463 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 SLC9A2Q9UBY0 812 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 DNAJC12Q9UKB3 198 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 ZNF214Q9UL59 606 aaPredicted RBP7.2□□□□□ -1.26
USP28-206ENST00000538224 IGSF9BQ9UPX0 1349 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 ZSWIM8A7E2V4 1837 aa7.2□□□□□ -1.26
USP28-206ENST00000538224 ZNFX1Q9P2E3 1918 aaKnown RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 POLR2AP24928 1970 aaKnown RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 CCDC66A2RUB6 948 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ANKRD62A6NC57 917 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 PGRMC1O00264 195 aaKnown RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 PDE2AO00408 941 aaPredicted RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 BACH1O14867 736 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ZBTB39O15060 712 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ZNF185O15231 689 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ZC3H11AO75152 810 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP28-206ENST00000538224 KIF4AO95239 1232 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 EGFRP00533 1210 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 TRIM49P0CI25 452 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 TRIM49CP0CI26 452 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 KCNA2P16389 499 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 TNFAIP3P21580 790 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 GARTP22102 1010 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ICAM3P32942 547 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 HADHBP55084 474 aaKnown RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 PEX3P56589 373 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 APBA1Q02410 837 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 DRAP1Q14919 205 aaPredicted RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 TCEAL1Q15170 157 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 STXBP2Q15833 593 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 CBWD6Q4V339 395 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 EPC2Q52LR7 807 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 BRDTQ58F21 947 aaPredicted RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 XKR3Q5GH77 459 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 CBWD3Q5JTY5 395 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 CBWD5Q5RIA9 395 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 PPP1R2P3Q6NXS1 205 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 PEX26Q7Z412 305 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 SLFN11Q7Z7L1 901 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 RHOT2Q8IXI1 618 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 IFT20Q8IY31 132 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 EXOC8Q8IYI6 725 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ANKRD13CQ8N6S4 541 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 TMEM161BQ8NDZ6 487 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP28-206ENST00000538224 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 FBXO41Q8TF61 875 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 COG1Q8WTW3 980 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 U2AF1L4Q8WU68 220 aaKnown RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 EXOC4Q96A65 974 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 CEP170P1Q96L14 293 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 NTPCRQ9BSD7 190 aaKnown RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 ATP6V0A4Q9HBG4 840 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 KMT5AQ9NQR1 393 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 PSD3Q9NYI0 1048 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 CYP39A1Q9NYL5 469 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 GGA3Q9NZ52 723 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 PPP1R1BQ9UD71 204 aaPredicted RBP7.19□□□□□ -1.26
USP28-206ENST00000538224 SALL4Q9UJQ4 1053 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 AMFRQ9UKV5 643 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 TBX20Q9UMR3 447 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 EMSYQ7Z589 1322 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 ZNF541Q9H0D2 1346 aa7.19□□□□□ -1.26
USP28-206ENST00000538224 DENND3A2RUS2 1198 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 CCDC169A6NNP5 214 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 SPDYE16A6NNV3 312 aaPredicted RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 MIF4GDA9UHW6 222 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 SPATA31C2B4DYI2 1134 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP28-206ENST00000538224 KCNK3O14649 394 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 SLC16A4O15374 487 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 ATP9AO75110 1047 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 FTCDO95954 541 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 CCNE2O96020 404 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 TFRCP02786 760 aaKnown RBP7.18□□□□□ -1.26
USP28-206ENST00000538224 SUPT20HL2P0C7V6 817 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 HSPA6P17066 643 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 RFC5P40937 340 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 NPTX2P47972 431 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 MFAP3P55082 362 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 PRKCEQ02156 737 aa7.18□□□□□ -1.26
USP28-206ENST00000538224 TMEM132BQ14DG7 1078 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms