RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-209	ENST00000537877	LMBR1	Q8WVP7	490 aa		13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	PRPF31	Q8WWY3	499 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	MAP7D2	Q96T17	732 aa		13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	KIFC3	Q9BVG8	833 aa		13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	XPO4	Q9C0E2	1151 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	C2orf40	Q9H1Z8	148 aa		13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	TMEM134	Q9H6X4	195 aa		13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	HMX1	Q9NP08	348 aa	Predicted RBP	13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	AGPAT3	Q9NRZ7	376 aa		13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.56	□□□□□ -0.24
DDB1-209	ENST00000537877	KAT6A	Q92794	2004 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877		A0A1B0GTH6	734 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	LRRC10B	A6NIK2	292 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	SLC16A3	O15427	465 aa	Known RBP	13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	NR3C1	P04150	777 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	TPM2	P07951	284 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	GNAT1	P11488	350 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	HOXC8	P31273	242 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	MARS	P56192	900 aa	Known RBP	13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	POU5F1B	Q06416	359 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	STRN3	Q13033	797 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	ADAM9	Q13443	819 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	MARCH8	Q5T0T0	291 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	RNF180	Q86T96	592 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	KSR1	Q8IVT5	923 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	ZBTB8OS	Q8IWT0	167 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	METTL13	Q8N6R0	699 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	DNAJC5G	Q8N7S2	189 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	MKNK1	Q9BUB5	465 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	NFKBIZ	Q9BYH8	718 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	PTPN22	Q9Y2R2	807 aa		13.55	□□□□□ -0.24
DDB1-209	ENST00000537877	CABYR	O75952	493 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	PIGR	P01833	764 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	MTIF2	P46199	727 aa	Known RBP	13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	COPB1	P53618	953 aa	Known RBP	13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	ADAM17	P78536	824 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	CCDC40	Q4G0X9	1142 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	NFRKB	Q6P4R8	1299 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	TAS1R3	Q7RTX0	852 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	RHPN2	Q8IUC4	686 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	RNF149	Q8NC42	400 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	SETD4	Q9NVD3	440 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	DMAC2	Q9NW81	257 aa		13.54	□□□□□ -0.24
DDB1-209	ENST00000537877	SMIM35	A0A1B0GVV1	85 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	C17orf102	A2RUQ5	167 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877		K7ERI5	159 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	EPB41	P11171	864 aa	Known RBP	13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	PHKA2	P46019	1235 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	CDC42EP1	Q00587	391 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	ARMCX5	Q6P1M9	558 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	CXCL17	Q6UXB2	119 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	ZNF710	Q8N1W2	664 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	C7orf31	Q8N865	590 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	TUBGCP2	Q9BSJ2	902 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	CCDC113	Q9H0I3	377 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	METTL14	Q9HCE5	456 aa	Known RBP	13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	RTN4	Q9NQC3	1192 aa	Known RBP	13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	TAB2	Q9NYJ8	693 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	AKT3	Q9Y243	479 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	EVPL	Q92817	2033 aa		13.53	□□□□□ -0.24
DDB1-209	ENST00000537877	MOXD2P	A6NHM9	499 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	LGALS16	A8MUM7	142 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	HNRNPDL	O14979	420 aa	Known RBP	13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	N4BP3	O15049	544 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	KIAA0391	O15091	583 aa	Known RBP	13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	CLIC2	O15247	247 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	ASGR1	P07306	291 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	CHMP4BP1	P59074	171 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	PTEN	P60484	403 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	PPP2R3A	Q06190	1150 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	KCNA10	Q16322	511 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	MAN2A1	Q16706	1144 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	FRMD5	Q7Z6J6	570 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	ZNF410	Q86VK4	478 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	SESTD1	Q86VW0	696 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	ZBTB10	Q96DT7	871 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	BICD1	Q96G01	975 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	EEF2KMT	Q96G04	330 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	NLRP4	Q96MN2	994 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	TSEN34	Q9BSV6	310 aa	Known RBP	13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	INTS13	Q9NVM9	706 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	HDAC6	Q9UBN7	1215 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	FRMD4B	Q9Y2L6	1034 aa		13.52	□□□□□ -0.25
DDB1-209	ENST00000537877	GOLGA6L6	A8MZA4	724 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	MAPK13	O15264	365 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	RPLP2	P05387	115 aa	Known RBP	13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	PRKCB	P05771	671 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	SRGAP2C	P0DJJ0	459 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	CYP2C9	P11712	490 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	PRKCSH	P14314	528 aa	Predicted RBP	13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	GART	P22102	1010 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	PSMC2	P35998	433 aa	Known RBP	13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	LIG4	P49917	911 aa		13.51	□□□□□ -0.25
DDB1-209	ENST00000537877	CYP2J2	P51589	502 aa		13.51	□□□□□ -0.25

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