RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CUL9Q8IWT3 2517 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 A6NJR5 290 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 AIM2O14862 343 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TEX33O43247 280 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KRT37O76014 449 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ZBED1O96006 694 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 H2AFXP16104 143 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 BPIFB4P59827 614 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TAF12Q16514 161 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ANO4Q32M45 955 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SLC17A8Q8NDX2 589 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SLITRK6Q9H5Y7 841 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CCDC134Q9H6E4 229 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 INSRP06213 1382 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PPP6R2O75170 966 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SRGAP2BP0DMP2 458 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ATP6V1E1P36543 226 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TERB1Q8NA31 727 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ZC3H15Q8WU90 426 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 AGBL1Q96MI9 1066 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 RANBP17Q9H2T7 1088 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PITPNM2Q9BZ72 1349 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PCNX1Q96RV3 2341 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 UBOX5O94941 541 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 RFC5P40937 340 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ATXN3P54252 364 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PPIDQ08752 370 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 FAM102BQ5T8I3 360 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 C4orf50Q6ZRC1 276 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CCDC149Q6ZUS6 474 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PRCCQ92733 491 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ATAD3AQ9NVI7 634 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 LAMC1P11047 1609 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM49P0CI25 452 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM49CP0CI26 452 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PECAM1P16284 738 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TAC1P20366 129 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 POLR2BP30876 1174 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 EIF6P56537 245 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 NYAP1Q6ZVC0 841 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 NUP85Q9BW27 656 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TSSK1BQ9BXA7 367 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SUN2Q9UH99 717 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF532Q9HCE3 1301 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CCNHP51946 323 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 MCRS1Q96EZ8 462 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SOX13Q9UN79 622 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 LARGE1O95461 756 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CHEK2O96017 543 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CPA2P48052 419 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KRR1Q13601 381 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 USP33Q8TEY7 942 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TMA16Q96EY4 203 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KLHL4Q9C0H6 718 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ANO9A1A5B4 782 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 FAM187AA6NFU0 413 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 FOSL2P15408 326 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KRT76Q01546 638 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 GRIN1Q05586 938 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TTC33Q6PID6 262 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 LRRC34Q8IZ02 419 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 LINC00301Q8NCQ3 95 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 RAPGEF6Q8TEU7 1601 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 IPO5O00410 1097 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 PRPF6O94906 941 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KCNA1Q09470 495 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SNX30Q5VWJ9 437 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 POTEAQ6S8J7 498 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF804AQ7Z570 1209 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 FMR1NBQ8N0W7 255 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 OR8H2Q8N162 312 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 NARS2Q96I59 477 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 BBS2Q9BXC9 721 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CARD14Q9BXL6 1004 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 RBM12Q9NTZ6 932 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 AGTP01019 485 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 OCM2P0CE71 109 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 OCMP0CE72 109 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CIITAP33076 1130 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KYNUQ16719 465 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 USH1GQ495M9 461 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 LMBRD2Q68DH5 695 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 RYBPQ8N488 228 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 STKLD1Q8NE28 680 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 LRRC39Q96DD0 335 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 NT5C1BQ96P26 610 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 MRPS26Q9BYN8 205 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 SLC38A10Q9HBR0 1119 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 UBE2TQ9NPD8 197 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 POLE3Q9NRF9 147 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 DNMT1P26358 1616 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 DCTN2Q13561 401 aaKnown RBP6.01□□□□□ -1.45
CSMD1-215ENST00000537824 TBC1D9BQ66K14 1250 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 RIN3Q8TB24 985 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 CAPSLQ8WWF8 208 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 ZIM3Q96PE6 472 aa6.01□□□□□ -1.45
CSMD1-215ENST00000537824 KRT27Q7Z3Y8 459 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KRT73Q86Y46 540 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 FANCBQ8NB91 859 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms