RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 SLMAPQ14BN4 828 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 TMED2Q15363 201 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 NFRKBQ6P4R8 1299 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 ARHGEF18Q6ZSZ5 1173 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 RNF10Q8N5U6 811 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 EFCC1Q9HA90 598 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 JPH1Q9HDC5 661 aaPredicted RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 RBAKQ9NYW8 714 aaPredicted RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 HDAC6Q9UBN7 1215 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 INPP5FQ9Y2H2 1132 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 PDE4DIPQ5VU43 2346 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 PDS5AQ29RF7 1337 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 RIC1Q4ADV7 1423 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 EXOC1LA0A1B0GW35 172 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 PSMD14O00487 310 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 PDXKO00764 312 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 RGL2O15211 777 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 NCK2O43639 380 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 NR3C2P08235 984 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 ECE1P42892 770 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 FXR1P51114 621 aaKnown RBP eCLIP10.79□□□□□ -0.68
GGA3-201ENST00000537686 DPYDQ12882 1025 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 LMBRD2Q68DH5 695 aaPredicted RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 BBS5Q8N3I7 341 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 RNF139Q8WU17 664 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 KCNB2Q92953 911 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 SPATA33Q96N06 139 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 INTS2Q9H0H0 1204 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 FBXO28Q9NVF7 368 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 FNDC3AQ9Y2H6 1198 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 ARHGEF37A1IGU5 675 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 ARHGAP42A6NI28 874 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 SUN1O94901 812 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 RHOBTB3O94955 611 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 MSH2P43246 934 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 STAT5BP51692 787 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 IFT88Q13099 833 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 ANGEL2Q5VTE6 544 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 DCLK2Q8N568 766 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 DDX47Q9H0S4 455 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 EPC1Q9H2F5 836 aa10.79□□□□□ -0.68
GGA3-201ENST00000537686 AGO2Q9UKV8 859 aaKnown RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 PACSIN2Q9UNF0 486 aaPredicted RBP10.79□□□□□ -0.68
GGA3-201ENST00000537686 ESYT3A0FGR9 886 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 MYL3P08590 195 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 AMIGO3Q86WK7 504 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 RNF149Q8NC42 400 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 MCUQ8NE86 351 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 REEP2Q9BRK0 252 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 EDEM3Q9BZQ6 932 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 TUFT1Q9NNX1 390 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 GGA3Q9NZ52 723 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 SYNGAP1Q96PV0 1343 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 TXNDC9O14530 226 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 GGPS1O95749 300 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 CLTAP09496 248 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 SRGNP10124 158 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 YWHABP31946 246 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 PRPSAP1Q14558 356 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 RAPH1Q70E73 1250 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 ADGRA1Q86SQ6 560 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 WDR24Q96S15 920 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 MRPL4Q9BYD3 311 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 ELP3Q9H9T3 547 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 SPON1Q9HCB6 807 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 LIMA1Q9UHB6 759 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 CPSF3Q9UKF6 684 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 CAPN11Q9UMQ6 739 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 KDM3BQ7LBC6 1761 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 A0A1B0GTH6 734 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 SLC4A1P02730 911 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 TXNP10599 105 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 CA4P22748 312 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 TSNAXIP1Q2TAA8 658 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 SAMD7Q7Z3H4 446 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
GGA3-201ENST00000537686 HSPH1Q92598 858 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 OSBPL9Q96SU4 736 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 C2orf40Q9H1Z8 148 aa10.78□□□□□ -0.68
GGA3-201ENST00000537686 A0A1B0GUA9 196 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 MT-ND3P03897 115 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 PCGF5Q86SE9 256 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 CFAP57Q96MR6 1250 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 MMP19Q99542 508 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 C7orf25Q9BPX7 421 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 DDX23Q9BUQ8 820 aaKnown RBP10.77□□□□□ -0.68
GGA3-201ENST00000537686 DEFB129Q9H1M3 183 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 PCSK1NQ9UHG2 260 aa10.77□□□□□ -0.68
GGA3-201ENST00000537686 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 TBX3O15119 743 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 NR1D1P20393 614 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 CUL1Q13616 776 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 FRMD5Q7Z6J6 570 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 CCDC197Q8NCU1 140 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 ENGASEQ8NFI3 743 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 ZNF564Q8TBZ8 553 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms