RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 KIAA1841Q6NSI8 718 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 TIGD7Q6NT04 549 aaPredicted RBP6.87□□□□□ -1.31
VBP1-203ENST00000535916 MDGA1Q8NFP4 955 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 SH3TC2Q8TF17 1288 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 SLC25A43Q8WUT9 341 aaPredicted RBP6.87□□□□□ -1.31
VBP1-203ENST00000535916 ZG16BQ96DA0 208 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 SOX7Q9BT81 388 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 SPO11Q9Y5K1 396 aa6.87□□□□□ -1.31
VBP1-203ENST00000535916 GOLGA6L6A8MZA4 724 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 FOXN1O15353 648 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 OPHN1O60890 802 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 IPO13O94829 963 aaKnown RBP6.86□□□□□ -1.31
VBP1-203ENST00000535916 PTGS2P35354 604 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 NPEPPSP55786 919 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 FAM214AQ32MH5 1076 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 DNAJC10Q8IXB1 793 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 HAS1Q92839 578 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 ZMAT4Q9H898 229 aa6.86□□□□□ -1.31
VBP1-203ENST00000535916 GRXCR1A8MXD5 290 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 MTSS1O43312 755 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 ASMTLO95671 621 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 ATP2A2P16615 1042 aaKnown RBP6.85□□□□□ -1.31
VBP1-203ENST00000535916 COL10A1Q03692 680 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 FSTL1Q12841 308 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.314e-8■□□□□ 9.3
VBP1-203ENST00000535916 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 ZNF276Q8N554 614 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 UIMC1Q96RL1 719 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
VBP1-203ENST00000535916 OSBPL6Q9BZF3 934 aa6.85□□□□□ -1.31
VBP1-203ENST00000535916 GAAP10253 952 aa6.84□□□□□ -1.31
VBP1-203ENST00000535916 NR4A1P22736 598 aa6.84□□□□□ -1.31
VBP1-203ENST00000535916 ST8SIA2Q92186 375 aa6.84□□□□□ -1.31
VBP1-203ENST00000535916 MRFAP1L1Q96HT8 127 aa6.84□□□□□ -1.31
VBP1-203ENST00000535916 ING3Q9NXR8 418 aa6.84□□□□□ -1.31
VBP1-203ENST00000535916 TMEM191CA6NGB0 347 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 MAFGO15525 162 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 FSBPO95073 299 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 PCDH8O95206 1070 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 GNAT2P19087 354 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 HK1P19367 917 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 MAN2A1Q16706 1144 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 NAIF1Q69YI7 327 aaPredicted RBP6.83□□□□□ -1.32
VBP1-203ENST00000535916 RHOUQ7L0Q8 258 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 APBB1IPQ7Z5R6 666 aaPredicted RBP6.83□□□□□ -1.32
VBP1-203ENST00000535916 PIK3C3Q8NEB9 887 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 LENG9Q96B70 501 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
VBP1-203ENST00000535916 MAGEC2Q9UBF1 373 aaPredicted RBP6.83□□□□□ -1.32
VBP1-203ENST00000535916 ELL2O00472 640 aaPredicted RBP6.82□□□□□ -1.32
VBP1-203ENST00000535916 RFPL3O75679 317 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 CFBP00751 764 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 ZZZ3Q8IYH5 903 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 NXPE1Q8N323 547 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 CRAMP1Q96RY5 1269 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 ORAI3Q9BRQ5 295 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 ENKD1Q9H0I2 346 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 ZKSCAN5Q9Y2L8 839 aa6.82□□□□□ -1.32
VBP1-203ENST00000535916 ZNF891A8MT65 544 aaPredicted RBP6.81□□□□□ -1.32
VBP1-203ENST00000535916 KPNA6O60684 536 aa6.81□□□□□ -1.32
VBP1-203ENST00000535916 ALDH1A2O94788 518 aa6.81□□□□□ -1.32
VBP1-203ENST00000535916 DCAF17Q5H9S7 520 aaPredicted RBP6.81□□□□□ -1.32
VBP1-203ENST00000535916 MBNL2Q5VZF2 373 aaKnown RBP6.81□□□□□ -1.32
VBP1-203ENST00000535916 VRK3Q8IV63 474 aa6.81□□□□□ -1.32
VBP1-203ENST00000535916 PPP1R14CQ8TAE6 165 aa6.81□□□□□ -1.32
VBP1-203ENST00000535916 ZSWIM4Q9H7M6 989 aa6.81□□□□□ -1.32
VBP1-203ENST00000535916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.81□□□□□ -1.32
VBP1-203ENST00000535916 SORCS3Q9UPU3 1222 aa6.81□□□□□ -1.32
VBP1-203ENST00000535916 MYPNQ86TC9 1320 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 HOXA3O43365 443 aaPredicted RBP6.8□□□□□ -1.32
VBP1-203ENST00000535916 PPFIA2O75334 1257 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 F2P00734 622 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 CD40P25942 277 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 DSG1Q02413 1049 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 CD69Q07108 199 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 CXorf67Q86X51 503 aaPredicted RBP6.8□□□□□ -1.32
VBP1-203ENST00000535916 UNC5BQ8IZJ1 945 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 SYNE4Q8N205 404 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 EFHBQ8N7U6 833 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 CPT1CQ8TCG5 803 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 CHTF18Q8WVB6 975 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 SREK1Q8WXA9 508 aaKnown RBP6.8□□□□□ -1.32
VBP1-203ENST00000535916 INTS7Q9NVH2 962 aaKnown RBP6.8□□□□□ -1.32
VBP1-203ENST00000535916 IFT57Q9NWB7 429 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 THG1LQ9NWX6 298 aaKnown RBP6.8□□□□□ -1.32
VBP1-203ENST00000535916 FZD1Q9UP38 647 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 PCDHB6Q9Y5E3 794 aa6.8□□□□□ -1.32
VBP1-203ENST00000535916 FAM83GA6ND36 823 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 NRP1O14786 923 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 GAS7O60861 476 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 ITGB1P05556 798 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 PROZP22891 400 aa6.79□□□□□ -1.32
VBP1-203ENST00000535916 CASRP41180 1078 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms