RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
LINC01089-204ENST00000535643 CNGA4Q8IV77 575 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
LINC01089-204ENST00000535643 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 CNNM2Q9H8M5 875 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
LINC01089-204ENST00000535643 FLT1P17948 1338 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 FBN2P35556 2912 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 FANCGO15287 622 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 SASH3O75995 380 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 CAPNS1P04632 268 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 CHGBP05060 677 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 HOXB8P17481 243 aaPredicted RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 ACTN2P35609 894 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 ADD2P35612 726 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 PBX1P40424 430 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 TIMM10P62072 90 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 SPAG1Q07617 926 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 NTRK3Q16288 839 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 ZSCAN26Q16670 478 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 IQSEC1Q6DN90 963 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 WDR24Q96S15 920 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 RC3H2Q9HBD1 1191 aaKnown RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 FEZ2Q9UHY8 353 aaPredicted RBP13.18□□□□□ -0.3
LINC01089-204ENST00000535643 USTQ9Y2C2 406 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
LINC01089-204ENST00000535643 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 PHKA1P46020 1223 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 CCR10P46092 362 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 CPT1AP50416 773 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 NOVA1P51513 510 aaKnown RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 SEPT2Q15019 361 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 SPATA1Q5VX52 437 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 LEKR1Q6ZMV7 388 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 CHST3Q7LGC8 479 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 ZNF513Q8N8E2 541 aaPredicted RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 PJA1Q8NG27 643 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 TGFBRAP1Q8WUH2 860 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 FOXQ1Q9C009 403 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 ADAM7Q9H2U9 754 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 KCNK12Q9HB15 430 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 AATFQ9NY61 560 aaKnown RBP eCLIP13.17□□□□□ -0.34e-8■■■■■ 41
LINC01089-204ENST00000535643 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 SRPRBQ9Y5M8 271 aaKnown RBP13.17□□□□□ -0.3
LINC01089-204ENST00000535643 ADGRG1Q9Y653 693 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
LINC01089-204ENST00000535643 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 TK2O00142 265 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 SEC31AO94979 1220 aaKnown RBP13.16□□□□□ -0.3
LINC01089-204ENST00000535643 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 WEE2P0C1S8 567 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 CERKLQ49MI3 558 aaPredicted RBP13.16□□□□□ -0.3
LINC01089-204ENST00000535643 NAALADL2Q58DX5 795 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 BEND6Q5SZJ8 279 aaPredicted RBP13.16□□□□□ -0.3
LINC01089-204ENST00000535643 CES5AQ6NT32 575 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 TMTC1Q8IUR5 882 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
LINC01089-204ENST00000535643 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 GOLGA6L1Q8N7Z2 621 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
LINC01089-204ENST00000535643 DHX58Q96C10 678 aa13.16□□□□□ -0.3
LINC01089-204ENST00000535643 KRT23Q9C075 422 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms