RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
KNTC1-208ENST00000535410 RALGAPA2Q2PPJ7 1873 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 LAD1O00515 517 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 CSDE1O75534 798 aaKnown RBP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 U2AF2P26368 475 aaKnown RBP eCLIP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 TECP42680 631 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 RNASELQ05823 741 aaKnown RBP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 PDIA5Q14554 519 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 KCNT2Q6UVM3 1135 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 HACE1Q8IYU2 909 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 URGCPQ8TCY9 931 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 IGFLR1Q9H665 355 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 CWH43Q9H720 699 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 TLE6Q9H808 572 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 AGPAT5Q9NUQ2 364 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.29
KNTC1-208ENST00000535410 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.29
KNTC1-208ENST00000535410 CNTNAP2Q9UHC6 1331 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 H3BQ06 376 aaPredicted RBP13.2□□□□□ -0.3
KNTC1-208ENST00000535410 RBAK-RBAKDNI3L0D1 243 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 RPA1P27694 616 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 RARRES1P49788 294 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 PTENP60484 403 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 HYAL1Q12794 435 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 ADAM15Q13444 863 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
KNTC1-208ENST00000535410 HELQQ8TDG4 1101 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
KNTC1-208ENST00000535410 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
KNTC1-208ENST00000535410 PCDHB2Q9Y5E7 798 aa13.2□□□□□ -0.3
KNTC1-208ENST00000535410 COL4A4P53420 1690 aaPredicted RBP13.2□□□□□ -0.3
KNTC1-208ENST00000535410 ARHGEF35A5YM69 484 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 POTEMA6NI47 508 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 H3BQV1 296 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 INO80B-WBP1J3KQ70 363 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 ZBTB39O15060 712 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 ARL2P36404 184 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 NDUFV1P49821 464 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
KNTC1-208ENST00000535410 CAMK1Q14012 370 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 GIT2Q14161 759 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 NOMO2Q5JPE7 1267 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 NOTUMQ6P988 496 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 TMC7Q7Z402 723 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 CATSPER3Q86XQ3 398 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
KNTC1-208ENST00000535410 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 TMEM169Q96HH4 297 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 FAM193BQ96PV7 902 aaPredicted RBP13.19□□□□□ -0.3
KNTC1-208ENST00000535410 ENTPD7Q9NQZ7 604 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 CD207Q9UJ71 328 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 BRWD1Q9NSI6 2320 aa13.19□□□□□ -0.3
KNTC1-208ENST00000535410 NR1I2O75469 434 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 SPATA31C1P0DKV0 1188 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 DNAJB1P25685 340 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 SSTR3P32745 418 aaPredicted RBP13.18□□□□□ -0.3
KNTC1-208ENST00000535410 NRIP1P48552 1158 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 MRPL10Q7Z7H8 261 aaKnown RBP13.18□□□□□ -0.3
KNTC1-208ENST00000535410 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 FAM178BQ8IXR5 827 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 GJD3Q8N144 294 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 KCTD17Q8N5Z5 321 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 TMX3Q96JJ7 454 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 NECAB3Q96P71 396 aaPredicted RBP13.18□□□□□ -0.3
KNTC1-208ENST00000535410 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
KNTC1-208ENST00000535410 C2orf40Q9H1Z8 148 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
KNTC1-208ENST00000535410 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
KNTC1-208ENST00000535410 LOXHD1Q8IVV2 1947 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 NLRC5Q86WI3 1866 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 OFD1O75665 1012 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 CSPG5O95196 566 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 ALDH2P05091 517 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 ITGA4P13612 1032 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 CYP11B2P19099 503 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 PRPHP41219 470 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms