RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	GAS7	O60861	476 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	CLASP2	O75122	1294 aa	Known RBP	12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	ZNF623	O75123	536 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	PSMD10	O75832	226 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	STBD1	O95210	358 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	SKI	P12755	728 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	CYP3A7	P24462	503 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	AKAP17A	Q02040	695 aa	Known RBP	12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	GIT2	Q14161	759 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	BMS1	Q14692	1282 aa	Known RBP	12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647		Q4G0T1	1027 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	XKR3	Q5GH77	459 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	CES5A	Q6NT32	575 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	BLOC1S2	Q6QNY1	142 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	UBALD2	Q8IYN6	164 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	FAM177A1	Q8N128	213 aa	Predicted RBP	12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	DDX12P	Q92771	950 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	RIPOR3	Q96MK2	946 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	PHOX2B	Q99453	314 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	HCFC2	Q9Y5Z7	792 aa		12.99	□□□□□ -0.33
CTNND1-238	ENST00000534647	ST18	O60284	1047 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	CPA1	P15085	419 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	PBX3	P40426	434 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	MTHFR	P42898	656 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	PHKA2	P46019	1235 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	DNM2	P50570	870 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	POLG	P54098	1239 aa	Predicted RBP	12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	BCAR1	P56945	870 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	UGCG	Q16739	394 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	LRCH2	Q5VUJ6	765 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	LLGL2	Q6P1M3	1020 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	MOXD1	Q6UVY6	613 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	DDX53	Q86TM3	631 aa	Known RBP	12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	ZNF410	Q86VK4	478 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	HELQ	Q8TDG4	1101 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	NLRP7	Q8WX94	980 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	PHKB	Q93100	1093 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	MBOAT7	Q96N66	472 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	TEKT3	Q9BXF9	490 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	INO80B	Q9C086	356 aa	Predicted RBP	12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	UNC45A	Q9H3U1	944 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	UPF2	Q9HAU5	1272 aa	Known RBP	12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	SORCS3	Q9UPU3	1222 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	SNX14	Q9Y5W7	946 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	WDFY4	Q6ZS81	3184 aa		12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	MYH9	P35579	1960 aa	Known RBP	12.98	□□□□□ -0.33
CTNND1-238	ENST00000534647	CACNA1H	O95180	2353 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	POM121C	A8CG34	1229 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	CXCL14	O95715	111 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	RPS6KB1	P23443	525 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	PSMA5	P28066	241 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	PDIA3	P30101	505 aa	Known RBP	12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	VCP	P55072	806 aa	Known RBP	12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	ZDHHC14	Q8IZN3	488 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	RNF169	Q8NCN4	708 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	TMEM169	Q96HH4	297 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	JAKMIP1	Q96N16	626 aa	Known RBP	12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	SCLT1	Q96NL6	688 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	ZBP1	Q9H171	429 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	DZANK1	Q9NVP4	752 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647	STK39	Q9UEW8	545 aa		12.97	□□□□□ -0.33
CTNND1-238	ENST00000534647		M0R2N6	131 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	EIF5B	O60841	1220 aa	Known RBP	12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	MAF	O75444	373 aa	Predicted RBP	12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	CTSA	P10619	480 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	FGFR4	P22455	802 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	SFPQ	P23246	707 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	RAB27A	P51159	221 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	DRP2	Q13474	957 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	MTMR3	Q13615	1198 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	GALNT17	Q6IS24	598 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	MIER3	Q7Z3K6	550 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	VPS52	Q8N1B4	723 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	KREMEN2	Q8NCW0	462 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	TBCK	Q8TEA7	893 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	SLC22A17	Q8WUG5	538 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	IGSF21	Q96ID5	467 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	ZNF668	Q96K58	619 aa	Predicted RBP	12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	JPH2	Q9BR39	696 aa	Predicted RBP	12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	APOL5	Q9BWW9	433 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	SLC26A6	Q9BXS9	759 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	POMK	Q9H5K3	350 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	VPS54	Q9P1Q0	977 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647	PCDHA4	Q9UN74	947 aa		12.96	□□□□□ -0.33
CTNND1-238	ENST00000534647		A0A087WZ62	844 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	C2CD4D	B7Z1M9	353 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	NT5C1B-RDH14	C9J2C7	533 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	PROB1	E7EW31	1015 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	EPB41L2	O43491	1005 aa	Known RBP	12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	CHMP2A	O43633	222 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	GALT	P07902	379 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	NLRP5	P59047	1200 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	PSMC5	P62195	406 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	NOMO2	Q5JPE7	1267 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	ATAT1	Q5SQI0	421 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	KIAA1841	Q6NSI8	718 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	GLB1L	Q6UWU2	654 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms