RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 PI15O43692 258 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 OFD1O75665 1012 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTSB-230ENST00000534149 NPR3P17342 541 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 SFNP31947 248 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 JAK3P52333 1124 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 GPR149Q86SP6 731 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 PPFIBP1Q86W92 1011 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 ADSSL1Q8N142 457 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 RSPH1Q8WYR4 309 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 SLC5A5Q92911 643 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 PHKBQ93100 1093 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 CEP89Q96ST8 783 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 RIT2Q99578 217 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 TRAIPQ9BWF2 469 aa16.81■□□□□ 0.28
CTSB-230ENST00000534149 IGKV6-21A0A0C4DH24 114 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 CARNS1A5YM72 827 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 PRPF3O43395 683 aaKnown RBP16.8■□□□□ 0.28
CTSB-230ENST00000534149 SKIP12755 728 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 AOC1P19801 751 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 TDGQ13569 410 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 OTOP3Q7RTS5 596 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 CATSPER4Q7RTX7 472 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 MIER3Q7Z3K6 550 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 NIFKQ9BYG3 293 aaKnown RBP16.8■□□□□ 0.28
CTSB-230ENST00000534149 SUCLA2Q9P2R7 463 aaPredicted RBP16.8■□□□□ 0.28
CTSB-230ENST00000534149 FBXL21Q9UKT6 434 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 DUSP12Q9UNI6 340 aa16.8■□□□□ 0.28
CTSB-230ENST00000534149 WDR87Q6ZQQ6 2873 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 STBD1O95210 358 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 CNPP09543 421 aaKnown RBP16.79■□□□□ 0.28
CTSB-230ENST00000534149 KLRC2P26717 231 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 DNM2P50570 870 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 RAB27AP51159 221 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 CLCN4P51793 760 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 CDC42EP1Q00587 391 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 AKAP17AQ02040 695 aaKnown RBP16.79■□□□□ 0.28
CTSB-230ENST00000534149 KRT32Q14532 448 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 XKR3Q5GH77 459 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 Q6ZUG5 572 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 ZNF410Q86VK4 478 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 CCDC105Q8IYK2 499 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 SIX5Q8N196 739 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 CCDC148Q8NFR7 591 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 BRF1Q92994 677 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 EMILIN2Q9BXX0 1053 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 KCNK12Q9HB15 430 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 VPS54Q9P1Q0 977 aa16.79■□□□□ 0.28
CTSB-230ENST00000534149 EP300Q09472 2414 aaPredicted RBP16.79■□□□□ 0.28
CTSB-230ENST00000534149 NID2Q14112 1375 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 ZNF623O75123 536 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 PSMD10O75832 226 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 DDHD2O94830 711 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 HMGB1P09429 215 aaKnown RBP16.78■□□□□ 0.28
CTSB-230ENST00000534149 ID4P47928 161 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 USP11P51784 963 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 ANGPT1Q15389 498 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 RDM1Q8NG50 284 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 URGCPQ8TCY9 931 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 SLC26A6Q9BXS9 759 aa16.78■□□□□ 0.28
CTSB-230ENST00000534149 INO80BQ9C086 356 aaPredicted RBP16.78■□□□□ 0.28
CTSB-230ENST00000534149 DDX11L8A8MPP1 907 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 NARSO43776 548 aaKnown RBP16.77■□□□□ 0.28
CTSB-230ENST00000534149 AFF1P51825 1210 aaKnown RBP16.77■□□□□ 0.28
CTSB-230ENST00000534149 LETM2Q2VYF4 491 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 AGMOQ6ZNB7 445 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 SKAP1Q86WV1 359 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 DTWD2Q8NBA8 298 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 PGBD4Q96DM1 585 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 RTP3Q9BQQ7 232 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
CTSB-230ENST00000534149 C2CD2LO14523 706 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 LILRB3O75022 631 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 N4BP1O75113 896 aaKnown RBP16.76■□□□□ 0.27
CTSB-230ENST00000534149 MAFO75444 373 aaPredicted RBP16.76■□□□□ 0.27
CTSB-230ENST00000534149 TDP2O95551 362 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 NTRK3Q16288 839 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 Q4G0T1 1027 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 C15orf39Q6ZRI6 1047 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 ERMP1Q7Z2K6 904 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 FAM193BQ96PV7 902 aaPredicted RBP16.76■□□□□ 0.27
CTSB-230ENST00000534149 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
CTSB-230ENST00000534149 RSAD1Q9HA92 442 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
CTSB-230ENST00000534149 AGPAT5Q9NUQ2 364 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
CTSB-230ENST00000534149 DOCK8Q8NF50 2099 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms