RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 MEIS3P2A8K0S8 358 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 MAPK7Q13164 816 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 AMHR2Q16671 573 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 TPRNQ4KMQ1 711 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 TWF2Q6IBS0 349 aaKnown RBP14.83□□□□□ -0.04
CMTM1-219ENST00000533953 ECHDC2Q86YB7 292 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 SYT2Q8N9I0 419 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-219ENST00000533953 SP7Q8TDD2 431 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-219ENST00000533953 ZNF689Q96CS4 500 aaPredicted RBP14.83□□□□□ -0.04
CMTM1-219ENST00000533953 CCSER1Q9C0I3 900 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 NT5C3AQ9H0P0 336 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 C1orf112Q9NSG2 853 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 RNF19AQ9NV58 838 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 ADGRA3Q8IWK6 1321 aa14.83□□□□□ -0.04
CMTM1-219ENST00000533953 LOXHD1Q8IVV2 1947 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 MICAL3Q7RTP6 2002 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 TMEM265A0A087WTH1 108 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 TSPAN1O60635 241 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 EDN1P05305 212 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 STAG3L1P0CL83 205 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 ATF7P17544 494 aaPredicted RBP14.82□□□□□ -0.04
CMTM1-219ENST00000533953 PEX3P56589 373 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
CMTM1-219ENST00000533953 UBXN11Q5T124 520 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 PDILTQ8N807 584 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 RAD54LQ92698 747 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 RC3H2Q9HBD1 1191 aaKnown RBP14.82□□□□□ -0.04
CMTM1-219ENST00000533953 AGPAT5Q9NUQ2 364 aa14.82□□□□□ -0.04
CMTM1-219ENST00000533953 CHD9Q3L8U1 2897 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 GBF1Q92538 1859 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 A0A0U1RQF3 1178 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 CCDC169A6NNP5 214 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 TBKBP1A7MCY6 615 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 YEATS4O95619 227 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 ARF4P18085 180 aaPredicted RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 IGFBP4P22692 258 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 ERVK-21P61565 698 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 POU5F1BQ06416 359 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 NAALADL2Q58DX5 795 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 AXDND1Q5T1B0 1012 aaPredicted RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 SHC4Q6S5L8 630 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 ZNF598Q86UK7 904 aaKnown RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 GPBP1Q86WP2 473 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 IFNLR1Q8IU57 520 aaPredicted RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 FIBCD1Q8N539 461 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 DEPTORQ8TB45 409 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 GDPD5Q8WTR4 605 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 TGS1Q96RS0 853 aaKnown RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 EIF2AQ9BY44 585 aaKnown RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 CHST12Q9NRB3 414 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 TMEM161AQ9NX61 479 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 PCDHA7Q9UN72 937 aa14.81□□□□□ -0.04
CMTM1-219ENST00000533953 MRPL42Q9Y6G3 142 aaKnown RBP14.81□□□□□ -0.04
CMTM1-219ENST00000533953 PPP6R2O75170 966 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 ERLIN2O94905 339 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 SLC34A2O95436 690 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 LINC00271P0C7V0 271 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 PDIA4P13667 645 aaKnown RBP14.8□□□□□ -0.04
CMTM1-219ENST00000533953 DDIT3P35638 169 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 NAMPTP43490 491 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 NPTX2P47972 431 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 AFF1P51825 1210 aaKnown RBP14.8□□□□□ -0.04
CMTM1-219ENST00000533953 CLLU1OSQ5K130 101 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 RRAGBQ5VZM2 374 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 HELQQ8TDG4 1101 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 PPM1EQ8WY54 764 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 STAMQ92783 540 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 KIFAP3Q92845 792 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 IFT74Q96LB3 600 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 FZD8Q9H461 694 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 FAM105AQ9NUU6 356 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 RCOR1Q9UKL0 485 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 HES2Q9Y543 173 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 PCDHB2Q9Y5E7 798 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 ARID2Q68CP9 1835 aa14.8□□□□□ -0.04
CMTM1-219ENST00000533953 SLC16A4O15374 487 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 LPXNO60711 386 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 CUTAO60888 179 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 CSPG5O95196 566 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 FOSL2P15408 326 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 GUCY2CP25092 1073 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 ME1P48163 572 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 TTC3P53804 2025 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 GIT2Q14161 759 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 CCDC85BQ15834 202 aaPredicted RBP14.79□□□□□ -0.04
CMTM1-219ENST00000533953 EPC2Q52LR7 807 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 CDCA2Q69YH5 1023 aaPredicted RBP14.79□□□□□ -0.04
CMTM1-219ENST00000533953 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 DYMQ7RTS9 669 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 ZBTB8OSQ8IWT0 167 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 TMEM192Q8IY95 271 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 REEP2Q9BRK0 252 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 APOL6Q9BWW8 343 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 CCDC113Q9H0I3 377 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 ZHX3Q9H4I2 956 aa14.79□□□□□ -0.04
CMTM1-219ENST00000533953 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
CMTM1-219ENST00000533953 GDPD2Q9HCC8 539 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms