RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 HS2ST1Q7LGA3 356 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 RASGEF1CQ8N431 466 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 FAM20AQ96MK3 541 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 PARVGQ9HBI0 331 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 WRAP73Q9P2S5 460 aaPredicted RBP20.9■□□□□ 0.94
CAPN1-226ENST00000533820 DAAM1Q9Y4D1 1078 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 DDX3YO15523 660 aaKnown RBP20.89■□□□□ 0.94
CAPN1-226ENST00000533820 GCKP35557 465 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 DLG4P78352 724 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 MTMR3Q13615 1198 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 OLIG1Q8TAK6 271 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 FBXO25Q8TCJ0 367 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 ATP8B4Q8TF62 1192 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 DCAF4Q8WV16 495 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 CPSF2Q9P2I0 782 aaKnown RBP20.89■□□□□ 0.94
CAPN1-226ENST00000533820 NENFQ9UMX5 172 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 FRMD4BQ9Y2L6 1034 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 PTPN22Q9Y2R2 807 aa20.89■□□□□ 0.94
CAPN1-226ENST00000533820 FSBPO95073 299 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 BIRC3Q13489 604 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 ABCB5Q2M3G0 1257 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 PHLDB3Q6NSJ2 640 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 SLC30A5Q8TAD4 765 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 SEC16BQ96JE7 1060 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 STK33Q9BYT3 514 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 OSBPL7Q9BZF2 842 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 FAM198AQ9UFP1 575 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 SLC16A3O15427 465 aaKnown RBP20.89■□□□□ 0.93
CAPN1-226ENST00000533820 LMNB1P20700 586 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 MYL7Q01449 175 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 NAA25Q14CX7 972 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 ZC3H12AQ5D1E8 599 aaKnown RBP20.89■□□□□ 0.93
CAPN1-226ENST00000533820 ZNF483Q8TF39 744 aaPredicted RBP20.89■□□□□ 0.93
CAPN1-226ENST00000533820 PSMD1Q99460 953 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 KIF9Q9HAQ2 790 aa20.89■□□□□ 0.93
CAPN1-226ENST00000533820 UBE2TQ9NPD8 197 aaPredicted RBP20.89■□□□□ 0.93
CAPN1-226ENST00000533820 DNM1LO00429 736 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 CTNND1O60716 968 aaKnown RBP20.88■□□□□ 0.93
CAPN1-226ENST00000533820 SNX1Q13596 522 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 MESDQ14696 234 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 EMC10Q5UCC4 262 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 CCDC25Q86WR0 208 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 BTBD6Q96KE9 485 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 FAM114A2Q9NRY5 505 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.88■□□□□ 0.93
CAPN1-226ENST00000533820 PI4KBQ9UBF8 816 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.88■□□□□ 0.93
CAPN1-226ENST00000533820 ECE1P42892 770 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 ZKSCAN8Q15776 578 aaPredicted RBP20.88■□□□□ 0.93
CAPN1-226ENST00000533820 SP8Q8IXZ3 490 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 KAT5Q92993 513 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 GPR88Q9GZN0 384 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 AGPAT3Q9NRZ7 376 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 ZBTB21Q9ULJ3 1066 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 ALG6Q9Y672 507 aa20.88■□□□□ 0.93
CAPN1-226ENST00000533820 A0A1W2PRG0 241 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 BMP3P12645 472 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 IFNAR2P48551 515 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 CCDC38Q502W7 563 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 C1orf186Q6ZWK4 172 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 ZSWIM2Q8NEG5 633 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 ITFG2Q969R8 447 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 ETAA1Q9NY74 926 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 NYAP2Q9P242 653 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 CHUKO15111 745 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 TBX3O15119 743 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 GAS7O60861 476 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 FTLP02792 175 aaPredicted RBP20.87■□□□□ 0.93
CAPN1-226ENST00000533820 POU5F1Q01860 360 aaKnown RBP20.87■□□□□ 0.93
CAPN1-226ENST00000533820 BMT2Q1RMZ1 405 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 SPATS2Q86XZ4 545 aaKnown RBP20.87■□□□□ 0.93
CAPN1-226ENST00000533820 CACNA2D3Q8IZS8 1091 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 CRAMP1Q96RY5 1269 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 TDRD3Q9H7E2 651 aaKnown RBP20.87■□□□□ 0.93
CAPN1-226ENST00000533820 HAUS2Q9NVX0 235 aa20.87■□□□□ 0.93
CAPN1-226ENST00000533820 A0A0A6YYK5 440 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 GOLGA6L10A0A0M3HER8 536 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 TMEM253P0C7T8 217 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 FGFR4P22455 802 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 HOXA10P31260 410 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 GCLMP48507 274 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 IFI35P80217 286 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 JAMLQ86YT9 394 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 HSD17B14Q9BPX1 270 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 ERP44Q9BS26 406 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 VCPKMTQ9H867 229 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 APEX2Q9UBZ4 518 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 POLRMTO00411 1230 aaKnown RBP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 KCNJ1P48048 391 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 PTENP60484 403 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 SLC29A2Q14542 456 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 MOXD1Q6UVY6 613 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 OTOP1Q7RTM1 612 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 RAB17Q9H0T7 212 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 AZI2Q9H6S1 392 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 SLC40A1Q9NP59 571 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 OLFML3Q9NRN5 406 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 PRR12Q9ULL5 1215 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 TCRBV7S2A1N4TA0A589 114 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms