RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 KCNC3Q14003 757 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 CTTNQ14247 550 aaKnown RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 DUSP6Q16828 381 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 RNF169Q8NCN4 708 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 RSPH1Q8WYR4 309 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 SNX21Q969T3 373 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 NLRP4Q96MN2 994 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 ZNF558Q96NG5 402 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 CDCA3Q99618 268 aaPredicted RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 TLE6Q9H808 572 aa12.64□□□□□ -0.39
CLCF1-202ENST00000533438 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 PIN4Q9Y237 131 aaKnown RBP12.64□□□□□ -0.39
CLCF1-202ENST00000533438 USP34Q70CQ2 3546 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 FSD2A1L4K1 749 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 PER2O15055 1255 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 ZBTB39O15060 712 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 GAS2O43903 313 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 MARCH6O60337 910 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 ZNF623O75123 536 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 SLITRK3O94933 977 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 LYPLA2O95372 231 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 SKIP12755 728 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 ANP32AP39687 249 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 CYP4A11Q02928 519 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 TWF2Q6IBS0 349 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 CATSPER4Q7RTX7 472 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 SRGAP1Q7Z6B7 1085 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 VN1R2Q8NFZ6 395 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 PRPF31Q8WWY3 499 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 MTMR9Q96QG7 549 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 HSD17B14Q9BPX1 270 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 EIF2AK1Q9BQI3 630 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 MINDY3Q9H8M7 445 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 AGPAT5Q9NUQ2 364 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 FAM105AQ9NUU6 356 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 PUF60Q9UHX1 559 aaKnown RBP12.63□□□□□ -0.39
CLCF1-202ENST00000533438 PCDHA12Q9UN75 941 aa12.63□□□□□ -0.39
CLCF1-202ENST00000533438 MEIS3P2A8K0S8 358 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 ASAP2O43150 1006 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 NEMFO60524 1076 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 MCM2P49736 904 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 RAB27AP51159 221 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 FOSBP53539 338 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
CLCF1-202ENST00000533438 KRT17Q04695 432 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 LAMTOR4Q0VGL1 99 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 EMC2Q15006 297 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 CALCRLQ16602 461 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 XKR9Q5GH70 373 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 PLPP4Q5VZY2 271 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 TMEM184AQ6ZMB5 413 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 TPH2Q8IWU9 490 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 TCP11Q8WWU5 503 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 LPPQ93052 612 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 MFSD14AQ96MC6 490 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
CLCF1-202ENST00000533438 MTRQ99707 1265 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 TCF25Q9BQ70 676 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 TTC12Q9H892 705 aaPredicted RBP12.62□□□□□ -0.39
CLCF1-202ENST00000533438 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
CLCF1-202ENST00000533438 XPNPEP1Q9NQW7 623 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
CLCF1-202ENST00000533438 SPG21Q9NZD8 308 aa12.62□□□□□ -0.39
CLCF1-202ENST00000533438 HIDE1A8MVS5 230 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 OFD1O75665 1012 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
CLCF1-202ENST00000533438 SRGAP2CP0DJJ0 459 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 HOXA11P31270 313 aaPredicted RBP12.61□□□□□ -0.39
CLCF1-202ENST00000533438 BCAR1P56945 870 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 TRIM29Q14134 588 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 HFE2Q6ZVN8 426 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 MRPL10Q7Z7H8 261 aaKnown RBP12.61□□□□□ -0.39
CLCF1-202ENST00000533438 RNF149Q8NC42 400 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 EDAQ92838 391 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 ENTPD7Q9NQZ7 604 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 LIMCH1Q9UPQ0 1083 aa12.61□□□□□ -0.39
CLCF1-202ENST00000533438 USP15Q9Y4E8 981 aaPredicted RBP12.61□□□□□ -0.39
CLCF1-202ENST00000533438 TDRD15B5MCY1 1934 aaKnown RBP12.6□□□□□ -0.39
CLCF1-202ENST00000533438 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 TXKP42681 527 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 ALDH7A1P49419 539 aaKnown RBP12.6□□□□□ -0.39
CLCF1-202ENST00000533438 RARRES1P49788 294 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 POU5F1BQ06416 359 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 CBX2Q14781 532 aaPredicted RBP12.6□□□□□ -0.39
CLCF1-202ENST00000533438 LONRF3Q496Y0 759 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 NOMO2Q5JPE7 1267 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 UBXN11Q5T124 520 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
CLCF1-202ENST00000533438 CCDC83Q8IWF9 413 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 284.5 ms