RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZC2HC1CQ53FD0 456 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 ZNF720Q7Z2F6 126 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 RETREG2Q8NC44 543 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 ASAP3Q8TDY4 903 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 SCFD1Q8WVM8 642 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 PRPF31Q8WWY3 499 aaKnown RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 CNOT6LQ96LI5 555 aaKnown RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 JPH2Q9BR39 696 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 KIFC3Q9BVG8 833 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 RRN3P2A6NIE6 340 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 MAGEB2O15479 319 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 GJB1P08034 283 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 GLRA2P23416 452 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 NPTX2P47972 431 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 IER5Q5VY09 327 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 CEP135Q66GS9 1140 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 KSR1Q8IVT5 923 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 C17orf75Q9HAS0 396 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 K7ENM7 598 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 SLC16A4O15374 487 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 PRPF6O94906 941 aaKnown RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 RTP1P59025 263 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 ZNF200P98182 395 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 PKN2Q16513 984 aaKnown RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 NFRKBQ6P4R8 1299 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 PKNOX2Q96KN3 472 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 IFT74Q96LB3 600 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 SPTLC3Q9NUV7 552 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 SUCLA2Q9P2R7 463 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 TRIP12Q14669 1992 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 FRMPD3Q5JV73 1810 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 GAS2O43903 313 aaKnown RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 ADKP55263 362 aaKnown RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 KCNA1Q09470 495 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 ZCWPW2Q504Y3 356 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 EPM2AIP1Q7L775 607 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-208ENST00000533123 ARRDC4Q8NCT1 418 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 TCP11Q8WWU5 503 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 VTI1AQ96AJ9 217 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 ZNF333Q96JL9 665 aa20.3■□□□□ 0.84
SMPD1-208ENST00000533123 DNM2P50570 870 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 SMTNP53814 917 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 LRRC63Q05C16 580 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 LRRC55Q6ZSA7 311 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 RHPN2Q8IUC4 686 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 PSPC1Q8WXF1 523 aaKnown RBP20.29■□□□□ 0.84
SMPD1-208ENST00000533123 NTPCRQ9BSD7 190 aaKnown RBP20.29■□□□□ 0.84
SMPD1-208ENST00000533123 TUBGCP2Q9BSJ2 902 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 KMT5AQ9NQR1 393 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 ADGRA3Q8IWK6 1321 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 C17orf102A2RUQ5 167 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 PES1O00541 588 aaKnown RBP20.29■□□□□ 0.84
SMPD1-208ENST00000533123 TREHO43280 583 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 NCKAP1LP55160 1127 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 ADAM17P78536 824 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 UBXN1Q04323 297 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 FAM47CQ5HY64 1035 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 HAUS6Q7Z4H7 955 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 LINC01465Q8N7H1 131 aa20.29■□□□□ 0.84
SMPD1-208ENST00000533123 ZNF668Q96K58 619 aaPredicted RBP20.29■□□□□ 0.84
SMPD1-208ENST00000533123 GRIN2DO15399 1336 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 MOXD2PA6NHM9 499 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 LGALS16A8MUM7 142 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 HOXD13P35453 343 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 LAMTOR4Q0VGL1 99 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 TC2NQ8N9U0 490 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 TMEM161BQ8NDZ6 487 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 ZNF507Q8TCN5 953 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 SPIRE2Q8WWL2 714 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 TSEN34Q9BSV6 310 aaKnown RBP20.28■□□□□ 0.84
SMPD1-208ENST00000533123 KCTD10Q9H3F6 313 aa20.28■□□□□ 0.84
SMPD1-208ENST00000533123 MBLAC1A4D2B0 266 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-208ENST00000533123 LRRIQ4A6NIV6 560 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 SRGAP2CP0DJJ0 459 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 MAPTP10636 758 aaKnown RBP20.27■□□□□ 0.84
SMPD1-208ENST00000533123 TMOD1P28289 359 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 RBM10P98175 930 aaKnown RBP20.27■□□□□ 0.84
SMPD1-208ENST00000533123 CAPSQ13938 189 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 FAM114A1Q8IWE2 563 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 CPLX3Q8WVH0 158 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 GLT1D1Q96MS3 346 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 TSG101Q99816 390 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 STRA6Q9BX79 667 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 GTF2IRD1Q9UHL9 959 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 AKT3Q9Y243 479 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 PCDHB13Q9Y5F0 798 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 PPP1R37O75864 691 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 VTNP04004 478 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 HOXC8P31273 242 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 NAMPTP43490 491 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 MTIF2P46199 727 aaKnown RBP20.27■□□□□ 0.84
SMPD1-208ENST00000533123 RBL2Q08999 1139 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 MXD4Q14582 209 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-208ENST00000533123 PPP2R5AQ15172 486 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 PPP1R16BQ96T49 567 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 IKZF4Q9H2S9 585 aa20.27■□□□□ 0.84
SMPD1-208ENST00000533123 MKI67P46013 3256 aaKnown RBP20.27■□□□□ 0.83
SMPD1-208ENST00000533123 USP27XA6NNY8 438 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 CABYRO75952 493 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms