RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ASAP3Q8TDY4 903 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 EIF4ENIF1Q9NRA8 985 aaKnown RBP33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 FAM105AQ9NUU6 356 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 ATG2AQ2TAZ0 1938 aa33.68■■■□□ 2.98
SSSCA1-207ENST00000533115 LAG3P18627 525 aa33.67■■■□□ 2.98
SSSCA1-207ENST00000533115 RAB27AP51159 221 aa33.67■■■□□ 2.98
SSSCA1-207ENST00000533115 PTENP60484 403 aa33.67■■■□□ 2.98
SSSCA1-207ENST00000533115 POU5F1BQ06416 359 aa33.67■■■□□ 2.98
SSSCA1-207ENST00000533115 HELQQ8TDG4 1101 aa33.67■■■□□ 2.98
SSSCA1-207ENST00000533115 CSPG5O95196 566 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 CAPSQ13938 189 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 CSPP1Q1MSJ5 1256 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 LARP1BQ659C4 914 aaKnown RBP33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 IFNLR1Q8IU57 520 aaPredicted RBP33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 IGSF22Q8N9C0 903 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 ADAMTS19Q8TE59 1207 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 POF1BQ8WVV4 589 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 RAB34Q9BZG1 259 aa33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 POLR3FQ9H1D9 316 aaPredicted RBP33.66■■■□□ 2.98
SSSCA1-207ENST00000533115 ZNF623O75123 536 aa33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 GLRA2P23416 452 aa33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 HOXA11P31270 313 aaPredicted RBP33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 CCT6AP40227 531 aaKnown RBP33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 PRPHP41219 470 aa33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 CUL4AQ13619 759 aa33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 PCBP1Q15365 356 aaKnown RBP eCLIP33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 STK24Q9Y6E0 443 aa33.65■■■□□ 2.98
SSSCA1-207ENST00000533115 FGF18O76093 207 aa33.64■■■□□ 2.98
SSSCA1-207ENST00000533115 THNSL1Q8IYQ7 743 aa33.64■■■□□ 2.98
SSSCA1-207ENST00000533115 MCPH1Q8NEM0 835 aa33.64■■■□□ 2.98
SSSCA1-207ENST00000533115 ERLIN2O94905 339 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 UBE3AQ05086 875 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 COL19A1Q14993 1142 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 ECM1Q16610 540 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 MAEAQ7L5Y9 396 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 RSPH1Q8WYR4 309 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 LPPQ93052 612 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 PABPC5Q96DU9 382 aaKnown RBP33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 MRPL9Q9BYD2 267 aaKnown RBP33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 NFKBIZQ9BYH8 718 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 GPRC5CQ9NQ84 441 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 PCDHB2Q9Y5E7 798 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 PLXNA4Q9HCM2 1894 aa33.63■■■□□ 2.97
SSSCA1-207ENST00000533115 ARHGEF35A5YM69 484 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 INO80B-WBP1J3KQ70 363 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 NCK2O43639 380 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 KCNA5P22460 613 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 IL17AQ16552 155 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 LONRF3Q496Y0 759 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 PADI6Q6TGC4 694 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 DTHD1Q6ZMT9 781 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 PGBD4Q96DM1 585 aa33.62■■■□□ 2.97
SSSCA1-207ENST00000533115 TSPAN1O60635 241 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 AXLP30530 894 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 IRS1P35568 1242 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 MBTD1Q05BQ5 628 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 HYAL1Q12794 435 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 UBXN11Q5T124 520 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 KCNT2Q6UVM3 1135 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 SNX29Q8TEQ0 813 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 ZNF558Q96NG5 402 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 UHRF1Q96T88 793 aaPredicted RBP33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 KIAA1024Q9UPX6 916 aa33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 TCF20Q9UGU0 1960 aaKnown RBP33.61■■■□□ 2.97
SSSCA1-207ENST00000533115 MEIS3P2A8K0S8 358 aa33.6■■■□□ 2.97
SSSCA1-207ENST00000533115 ATP2C1P98194 919 aaPredicted RBP33.6■■■□□ 2.97
SSSCA1-207ENST00000533115 LEXMQ3ZCV2 418 aa33.6■■■□□ 2.97
SSSCA1-207ENST00000533115 GLB1LQ6UWU2 654 aa33.6■■■□□ 2.97
SSSCA1-207ENST00000533115 CYP11B2P19099 503 aa33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 PLCB3Q01970 1234 aa33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 NCBP1Q09161 790 aaKnown RBP33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 KRT79Q5XKE5 535 aa33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 MRPL10Q7Z7H8 261 aaKnown RBP33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 PPP2R3CQ969Q6 453 aa33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 DDX19AQ9NUU7 478 aaKnown RBP33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 CLDND1Q9NY35 253 aa33.59■■■□□ 2.97
SSSCA1-207ENST00000533115 PPM1AP35813 382 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 PBX3P40426 434 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 AMHR2Q16671 573 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 EP400NLQ6ZTU2 488 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 CCDC51Q96ER9 411 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 BHMT2Q9H2M3 363 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 TLR9Q9NR96 1032 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 LZTS1Q9Y250 596 aa33.58■■■□□ 2.97
SSSCA1-207ENST00000533115 LRRIQ4A6NIV6 560 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 PP2D1A8MPX8 630 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 OFD1O75665 1012 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 CTC1Q2NKJ3 1217 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 NOMO2Q5JPE7 1267 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 NOTUMQ6P988 496 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 AGMOQ6ZNB7 445 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 MRPS27Q92552 414 aaKnown RBP33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 CPB2Q96IY4 423 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 IGFLR1Q9H665 355 aa33.57■■■□□ 2.96
SSSCA1-207ENST00000533115 GTF2F1P35269 517 aaKnown RBP eCLIP33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 ADGRD2Q7Z7M1 963 aa33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 CNNM3Q8NE01 707 aa33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 GADD45GIP1Q8TAE8 222 aaPredicted RBP33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 MICAL1Q8TDZ2 1067 aa33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 SPG21Q9NZD8 308 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 391.7 ms