RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 NCBP1Q09161 790 aaKnown RBP16.02■□□□□ 0.16
PUF60-220ENST00000532884 FOXD4L6Q3SYB3 417 aaPredicted RBP16.02■□□□□ 0.16
PUF60-220ENST00000532884 FOXD4L3Q6VB84 417 aaPredicted RBP16.02■□□□□ 0.16
PUF60-220ENST00000532884 RASSF8Q8NHQ8 419 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 HELQQ8TDG4 1101 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 BSNDQ8WZ55 320 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 CLP1Q92989 425 aaKnown RBP16.02■□□□□ 0.16
PUF60-220ENST00000532884 PNMA5Q96PV4 448 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
PUF60-220ENST00000532884 ALG13Q9NP73 1137 aaKnown RBP16.02■□□□□ 0.16
PUF60-220ENST00000532884 FAM105AQ9NUU6 356 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 RWDD3Q9Y3V2 267 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
PUF60-220ENST00000532884 ARID2Q68CP9 1835 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 HOXA2O43364 376 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 TSPAN1O60635 241 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 EOMESO95936 686 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 LINC00271P0C7V0 271 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 ATF7P17544 494 aaPredicted RBP16.01■□□□□ 0.15
PUF60-220ENST00000532884 POU3F3P20264 500 aaPredicted RBP16.01■□□□□ 0.15
PUF60-220ENST00000532884 HOXA11P31270 313 aaPredicted RBP16.01■□□□□ 0.15
PUF60-220ENST00000532884 MBTD1Q05BQ5 628 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 CLLU1OSQ5K130 101 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.01■□□□□ 0.15
PUF60-220ENST00000532884 DEPTORQ8TB45 409 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 IFT74Q96LB3 600 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 AK8Q96MA6 479 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 C11orf84Q9BUA3 381 aaPredicted RBP16.01■□□□□ 0.15
PUF60-220ENST00000532884 RUSC1Q9BVN2 902 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 TMEM117Q9H0C3 514 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 A0A0C4DFX4 3053 aa16.01■□□□□ 0.15
PUF60-220ENST00000532884 PRRC2BQ5JSZ5 2229 aaKnown RBP16■□□□□ 0.15
PUF60-220ENST00000532884 MEIS3P2A8K0S8 358 aa16■□□□□ 0.15
PUF60-220ENST00000532884 GRM6O15303 877 aa16■□□□□ 0.15
PUF60-220ENST00000532884 B4GALT5O43286 388 aa16■□□□□ 0.15
PUF60-220ENST00000532884 RB1P06400 928 aa16■□□□□ 0.15
PUF60-220ENST00000532884 SKIP12755 728 aa16■□□□□ 0.15
PUF60-220ENST00000532884 LONP1P36776 959 aaKnown RBP16■□□□□ 0.15
PUF60-220ENST00000532884 POU5F1BQ06416 359 aa16■□□□□ 0.15
PUF60-220ENST00000532884 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
PUF60-220ENST00000532884 PTPAQ15257 358 aa16■□□□□ 0.15
PUF60-220ENST00000532884 PTPROQ16827 1216 aa16■□□□□ 0.15
PUF60-220ENST00000532884 TMEM132AQ24JP5 1023 aa16■□□□□ 0.15
PUF60-220ENST00000532884 ZNF598Q86UK7 904 aaKnown RBP16■□□□□ 0.15
PUF60-220ENST00000532884 CDR2LQ86X02 465 aaPredicted RBP16■□□□□ 0.15
PUF60-220ENST00000532884 ZBTB8OSQ8IWT0 167 aa16■□□□□ 0.15
PUF60-220ENST00000532884 KLHL23Q8NBE8 558 aa16■□□□□ 0.15
PUF60-220ENST00000532884 CALML4Q96GE6 196 aa16■□□□□ 0.15
PUF60-220ENST00000532884 USP28Q96RU2 1077 aa16■□□□□ 0.15
PUF60-220ENST00000532884 KIFC3Q9BVG8 833 aa16■□□□□ 0.15
PUF60-220ENST00000532884 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
PUF60-220ENST00000532884 TFIP11Q9UBB9 837 aaKnown RBP16■□□□□ 0.15
PUF60-220ENST00000532884 USP20Q9Y2K6 914 aa16■□□□□ 0.15
PUF60-220ENST00000532884 COL4A6Q14031 1691 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 CCDC169A6NNP5 214 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 ARF4P18085 180 aaPredicted RBP15.99■□□□□ 0.15
PUF60-220ENST00000532884 RAB27AP51159 221 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 HYIQ5T013 277 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 UBXN11Q5T124 520 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 LRRC55Q6ZSA7 311 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 IFNLR1Q8IU57 520 aaPredicted RBP15.99■□□□□ 0.15
PUF60-220ENST00000532884 KIFAP3Q92845 792 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 MRPL38Q96DV4 380 aaKnown RBP15.99■□□□□ 0.15
PUF60-220ENST00000532884 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 TRAIPQ9BWF2 469 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 APOL6Q9BWW8 343 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 EIF2AQ9BY44 585 aaKnown RBP15.99■□□□□ 0.15
PUF60-220ENST00000532884 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 AAASQ9NRG9 546 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 LMCD1Q9NZU5 365 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
PUF60-220ENST00000532884 PLAGL2Q9UPG8 496 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 PCDHB12Q9Y5F1 795 aa15.99■□□□□ 0.15
PUF60-220ENST00000532884 NPHP3-ACAD11A0A0J9YXS1 232 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 C5orf67F2Z3F1 127 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 HIP1RO75146 1068 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 ITGB1P05556 798 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 PLA2G4BP0C869 781 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 PBX3P40426 434 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 NAMPTP43490 491 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 PEX3P56589 373 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 KARSQ15046 597 aaKnown RBP15.98■□□□□ 0.15
PUF60-220ENST00000532884 PPP2R5AQ15172 486 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 PCBP1Q15365 356 aaKnown RBP eCLIP15.98■□□□□ 0.157e-7■■□□□ 13.3
PUF60-220ENST00000532884 AMHR2Q16671 573 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 TMEM119Q4V9L6 283 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 GLB1LQ6UWU2 654 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 C1orf186Q6ZWK4 172 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 USP49Q70CQ1 688 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 THNSL1Q8IYQ7 743 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
PUF60-220ENST00000532884 EPSTI1Q96J88 318 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms