RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 FAM187AA6NFU0 413 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 HSF2BPO75031 334 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 HIP1RO75146 1068 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 ZC3H11AO75152 810 aaKnown RBP eCLIP6.29□□□□□ -1.4
RDX-213ENST00000532461 FTCDO95954 541 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 APBA3O96018 575 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 CYP1A2P05177 515 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 PEX5P50542 639 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 SNAP25P60880 206 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 MRPS9P82933 396 aaKnown RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 BIRC3Q13489 604 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 DHX34Q14147 1143 aaKnown RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 DRAP1Q14919 205 aaPredicted RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 UAP1Q16222 522 aaPredicted RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 FAM153CQ494X1 144 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 ZC2HC1CQ53FD0 456 aaPredicted RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 DUPD1Q68J44 220 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 GSPT2Q8IYD1 628 aaKnown RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 PRPF38AQ8NAV1 312 aaKnown RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 ZNF622Q969S3 477 aaKnown RBP eCLIP6.29□□□□□ -1.41e-8■■□□□ 11.5
RDX-213ENST00000532461 FAM81BQ96LP2 452 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 C12orf42Q96LP6 360 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 ACCSQ96QU6 501 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 NAP1L3Q99457 506 aaPredicted RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 KCNH7Q9NS40 1196 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 SMARCAL1Q9NZC9 954 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 TMOD2Q9NZR1 351 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 FAM153AQ9UHL3 310 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 NOC2LQ9Y3T9 749 aaKnown RBP6.29□□□□□ -1.4
RDX-213ENST00000532461 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
RDX-213ENST00000532461 ZMYND10O75800 440 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 NUDT17P0C025 328 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 MYL7Q01449 175 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SPP2Q13103 211 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 MTMR3Q13615 1198 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 COG2Q14746 738 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 PADI6Q6TGC4 694 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 MAP4K3Q8IVH8 894 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SLC35G2Q8TBE7 412 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 PIGOQ8TEQ8 1089 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SHC3Q92529 594 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 CENPTQ96BT3 561 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ATP6V1G3Q96LB4 118 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 RUNDC3BQ96NL0 473 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 AGPAT1Q99943 283 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 FAM107BQ9H098 131 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 EPB41L5Q9HCM4 733 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 FAM114A2Q9NRY5 505 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ZHX2Q9Y6X8 837 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ASTN2O75129 1339 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 LTBP3Q9NS15 1303 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 GRIN3BO60391 1043 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 RTN2O75298 545 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 STAM2O75886 525 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 CHRNB2P17787 502 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ZNF76P36508 570 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 PTGIRP43119 386 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 QARSP47897 775 aaKnown RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 CYP4A11Q02928 519 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 PTP4A2Q12974 167 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 PGM5Q15124 567 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 DLGAP5Q15398 846 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ZNF746Q6NUN9 644 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 TPH2Q8IWU9 490 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 PLEKHO2Q8TD55 490 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SYTL5Q8TDW5 730 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 TAF4BQ92750 862 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 LRRC45Q96CN5 670 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 DRC1Q96MC2 740 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 KRT12Q99456 494 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 LARSQ9P2J5 1176 aaKnown RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 FEZ2Q9UHY8 353 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 ZNRF3Q9ULT6 936 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 NFU1Q9UMS0 254 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 COG5Q9UP83 839 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 IGSF9BQ9UPX0 1349 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SBF1O95248 1867 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ERICH4A6NGS2 130 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ZBTB39O15060 712 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 SART1O43290 800 aaKnown RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 PPIP5K2O43314 1243 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 BUB1BO60566 1050 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 CTNND1O60716 968 aaKnown RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 PIGRP01833 764 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 RPS12P25398 132 aaKnown RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 CHRNA5P30532 468 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 TNNT3P45378 269 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
RDX-213ENST00000532461 IRX5P78411 483 aaPredicted RBP6.28□□□□□ -1.4
RDX-213ENST00000532461 GUCY2DQ02846 1103 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 ODR4Q5SWX8 454 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.28□□□□□ -1.4
RDX-213ENST00000532461 MAATS1Q7Z4T9 603 aa6.28□□□□□ -1.4
RDX-213ENST00000532461 TMC3Q7Z5M5 1100 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms