RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZRSR2Q15696 482 aaKnown RBP6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 INF2Q27J81 1249 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 C11orf91Q3C1V1 193 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 KRT40Q6A162 431 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 GDF6Q6KF10 455 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 MFSD5Q6N075 450 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 PIK3AP1Q6ZUJ8 805 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCDC155Q8N6L0 562 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 FAM184AQ8NB25 1140 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 TMX3Q96JJ7 454 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 C8orf76Q96K31 380 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 UIMC1Q96RL1 719 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 PRO3102Q9H379 93 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 SMARCAD1Q9H4L7 1026 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 AZI2Q9H6S1 392 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 ERAP1Q9NZ08 941 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 DDX25Q9UHL0 483 aaKnown RBP6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 GTF2IRD1Q9UHL9 959 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 SERTAD1Q9UHV2 236 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 LRFN2Q9ULH4 789 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 PLAAQ9Y263 795 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 MAP4K5Q9Y4K4 846 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 CYP3A7-CYP3A51PA0A087WV96 503 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 C17orf102A2RUQ5 167 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 BTBD18B2RXH4 712 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 MSH4O15457 936 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 DHX15O43143 795 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCNT1O60563 726 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CD2BP2O95400 341 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 TDP2O95551 362 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCNE2O96020 404 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 SMIM10L2AP0DMW4 78 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 SMIM10L2BP0DMW5 78 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 GNAT1P11488 350 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CSF2RAP15509 400 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 GCFC2P16383 781 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CYP3A7P24462 503 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 VARSP26640 1264 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 MARK3P27448 753 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 PMLP29590 882 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 GNALP38405 381 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 SLC26A2P50443 739 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 STAT5BP51692 787 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCL23P55773 120 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 KRT76Q01546 638 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 GUCY1B3Q02153 619 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 NR5A1Q13285 461 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 PPIGQ13427 754 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 BFSP2Q13515 415 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 BRD3Q15059 726 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 PPP2R5AQ15172 486 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 Q4G0T1 1027 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 MIS18BP1Q6P0N0 1132 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 MOXD1Q6UVY6 613 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 NEK8Q86SG6 692 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 SLC9A9Q8IVB4 645 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 WDR75Q8IWA0 830 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 DIS3L2Q8IYB7 885 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 TDHQ8IZJ6 230 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 LILRB2Q8N423 598 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 NME8Q8N427 588 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 TNPO1Q92973 898 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 LENG9Q96B70 501 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 ANAPC16Q96DE5 110 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 RIT2Q99578 217 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 NAP1L4Q99733 375 aaKnown RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 PLCD4Q9BRC7 762 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 SETD4Q9NVD3 440 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 SCHIP1Q9P0W5 487 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 CNTN3Q9P232 1028 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 ATP8A1Q9Y2Q0 1164 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 MSRB2Q9Y3D2 182 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 KIF3AQ9Y496 699 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 PDE4DIPQ5VU43 2346 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 UMODL1Q5DID0 1318 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 EMSYQ7Z589 1322 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 NRCAMQ92823 1304 aa6.5□□□□□ -1.37
HMGB1P42-201ENST00000532126 KIAA1217Q5T5P2 1943 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 ALPK3Q96L96 1907 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 WDR64B1ANS9 1081 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SLC37A4O43826 429 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 EDIL3O43854 480 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 GAS7O60861 476 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 STAU1O95793 577 aaKnown RBP6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PSAPP07602 524 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 EPHB4P54760 987 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZNF200P98182 395 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 FOXK2Q01167 660 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PPFIA1Q13136 1202 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SHHQ15465 462 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 MAP9Q49MG5 647 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 EARS2Q5JPH6 523 aaKnown RBP6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 LRCH2Q5VUJ6 765 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 FAM160B1Q5W0V3 765 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PPP4R3AQ6IN85 833 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 SWSAP1Q6NVH7 229 aa6.49□□□□□ -1.37
HMGB1P42-201ENST00000532126 PSRC1Q6PGN9 363 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms