RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 RBAK-RBAKDNI3L0D1 243 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 CLTBP09497 229 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 MAPTP10636 758 aaKnown RBP19.43■□□□□ 0.7
CTSB-222ENST00000531551 NLRP12P59046 1061 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 PTENP60484 403 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 STXBP4Q6ZWJ1 553 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 NELFCDQ8IXH7 590 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 SLC17A8Q8NDX2 589 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 CAGE1Q8TC20 777 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 PCDHB13Q9Y5F0 798 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 TRIP12Q14669 1992 aaPredicted RBP19.43■□□□□ 0.7
CTSB-222ENST00000531551 H0YCG3 227 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 K7ERI5 159 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 CHRNA1P02708 482 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 CRYBB1P53674 252 aaPredicted RBP19.43■□□□□ 0.7
CTSB-222ENST00000531551 HIPK3Q9H422 1215 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 MINDY3Q9H8M7 445 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 ARHGAP28Q9P2N2 729 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 EVPLQ92817 2033 aa19.43■□□□□ 0.7
CTSB-222ENST00000531551 FGFR4P22455 802 aa19.42■□□□□ 0.7
CTSB-222ENST00000531551 EFNA5P52803 228 aa19.42■□□□□ 0.7
CTSB-222ENST00000531551 TYRO3Q06418 890 aa19.42■□□□□ 0.7
CTSB-222ENST00000531551 STRN3Q13033 797 aa19.42■□□□□ 0.7
CTSB-222ENST00000531551 DPCR1Q3MIW9 517 aa19.42■□□□□ 0.7
CTSB-222ENST00000531551 CDCA2Q69YH5 1023 aaPredicted RBP19.42■□□□□ 0.7
CTSB-222ENST00000531551 MYOCDQ8IZQ8 938 aa19.42■□□□□ 0.7
CTSB-222ENST00000531551 CCDC192P0DO97 292 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 EIF4BP23588 611 aaKnown RBP19.41■□□□□ 0.7
CTSB-222ENST00000531551 PRCPP42785 496 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 GTF2BQ00403 316 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 MGAT3Q09327 533 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 KCNA1Q09470 495 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 MAPK6Q16659 721 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 KLHL10Q6JEL2 608 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 ZNF710Q8N1W2 664 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 SCFD1Q8WVM8 642 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 TMEM40Q8WWA1 233 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 TBX20Q9UMR3 447 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 USP20Q9Y2K6 914 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 UMODL1Q5DID0 1318 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 CAND2O75155 1236 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 DARSP14868 501 aaKnown RBP19.41■□□□□ 0.7
CTSB-222ENST00000531551 SELPP16109 830 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 MBTD1Q05BQ5 628 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 STIM1Q13586 685 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 STX1AQ16623 288 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 TMEM132AQ24JP5 1023 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 LRRC8DQ7L1W4 858 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 SRGAP1Q7Z6B7 1085 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 BICD1Q96G01 975 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
CTSB-222ENST00000531551 NFKBIZQ9BYH8 718 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 GTPBP4Q9BZE4 634 aaKnown RBP19.41■□□□□ 0.7
CTSB-222ENST00000531551 ANO10Q9NW15 660 aa19.41■□□□□ 0.7
CTSB-222ENST00000531551 PHLPP2Q6ZVD8 1323 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 KIF20AO95235 890 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 PRKCBP05771 671 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 GHRP10912 638 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 CD44P16070 742 aaKnown RBP19.4■□□□□ 0.7
CTSB-222ENST00000531551 CCL23P55773 120 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 ALCAMQ13740 583 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 EPM2AIP1Q7L775 607 aaPredicted RBP19.4■□□□□ 0.7
CTSB-222ENST00000531551 TAS1R3Q7RTX0 852 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 ACCSQ96QU6 501 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 ST6GALNAC4Q9H4F1 302 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 TMEM134Q9H6X4 195 aa19.4■□□□□ 0.7
CTSB-222ENST00000531551 EIF3DO15371 548 aaKnown RBP eCLIP19.39■□□□□ 0.7
CTSB-222ENST00000531551 RPS6KA5O75582 802 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 PPP1R37O75864 691 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 ERLIN2O94905 339 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 IQCF3P0C7M6 154 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 CYP2C18P33260 490 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 CATSPER4Q7RTX7 472 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 MLKLQ8NB16 471 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 ZNF507Q8TCN5 953 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 HTATIP2Q9BUP3 242 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 TBX21Q9UL17 535 aa19.39■□□□□ 0.7
CTSB-222ENST00000531551 NOC2LQ9Y3T9 749 aaKnown RBP19.39■□□□□ 0.7
CTSB-222ENST00000531551 PITPNM1O00562 1244 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 SFPQP23246 707 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTSB-222ENST00000531551 ABCD1P33897 745 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 NFX1Q12986 1120 aaKnown RBP19.39■□□□□ 0.69
CTSB-222ENST00000531551 FAM26DQ5JW98 314 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
CTSB-222ENST00000531551 C7orf61Q8IZ16 206 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 ADSSL1Q8N142 457 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 GUF1Q8N442 669 aaKnown RBP19.39■□□□□ 0.69
CTSB-222ENST00000531551 SCLYQ96I15 445 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 STRA6Q9BX79 667 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 DNAJC25Q9H1X3 360 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 IKZF4Q9H2S9 585 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 PRMT7Q9NVM4 692 aaPredicted RBP19.39■□□□□ 0.69
CTSB-222ENST00000531551 DACH1Q9UI36 760 aa19.39■□□□□ 0.69
CTSB-222ENST00000531551 PPP1R3GB7ZBB8 358 aa19.38■□□□□ 0.69
CTSB-222ENST00000531551 RBL2Q08999 1139 aa19.38■□□□□ 0.69
CTSB-222ENST00000531551 PRPF4BQ13523 1007 aaKnown RBP19.38■□□□□ 0.69
CTSB-222ENST00000531551 FBXO47Q5MNV8 452 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms