RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 LEXMQ3ZCV2 418 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 HAUS3Q68CZ6 603 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 MCTP1Q6DN14 999 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
CAPN1-221ENST00000531068 THNSL1Q8IYQ7 743 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 LRRC43Q8N309 656 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 PIGOQ8TEQ8 1089 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 POF1BQ8WVV4 589 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
CAPN1-221ENST00000531068 CHAMP1Q96JM3 812 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 CASD1Q96PB1 797 aa12.21□□□□□ -0.45
CAPN1-221ENST00000531068 UHRF1Q96T88 793 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-221ENST00000531068 MRPL9Q9BYD2 267 aaKnown RBP12.21□□□□□ -0.45
CAPN1-221ENST00000531068 DBR1Q9UK59 544 aaKnown RBP12.21□□□□□ -0.45
CAPN1-221ENST00000531068 DOCK5Q9H7D0 1870 aa12.21□□□□□ -0.46
CAPN1-221ENST00000531068 TNFRSF10AO00220 468 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 KCNA5P22460 613 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 AXLP30530 894 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 PPM1AP35813 382 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 ARL2P36404 184 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 KCNQ1P51787 676 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 RILPL1Q5EBL4 403 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 GLB1LQ6UWU2 654 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 COLGALT1Q8NBJ5 622 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 CNNM3Q8NE01 707 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 ZNF558Q96NG5 402 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-221ENST00000531068 AGPAT5Q9NUQ2 364 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 FAM105AQ9NUU6 356 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 FAM50BQ9Y247 325 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 LZTS1Q9Y250 596 aa12.2□□□□□ -0.46
CAPN1-221ENST00000531068 FSD2A1L4K1 749 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 INO80B-WBP1J3KQ70 363 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 FGF18O76093 207 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 ERLIN2O94905 339 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
CAPN1-221ENST00000531068 ALDH7A1P49419 539 aaKnown RBP12.19□□□□□ -0.46
CAPN1-221ENST00000531068 PTENP60484 403 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 PTGDRQ13258 359 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 CAMK1Q14012 370 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 BMS1Q14692 1282 aaKnown RBP12.19□□□□□ -0.46
CAPN1-221ENST00000531068 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 CLLU1OSQ5K130 101 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 MRPL10Q7Z7H8 261 aaKnown RBP12.19□□□□□ -0.46
CAPN1-221ENST00000531068 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-221ENST00000531068 HELQQ8TDG4 1101 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 CWH43Q9H720 699 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 XPNPEP1Q9NQW7 623 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 RNF19AQ9NV58 838 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 SPG21Q9NZD8 308 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 KANSL3Q9P2N6 904 aa12.19□□□□□ -0.46
CAPN1-221ENST00000531068 KAT6AQ92794 2004 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 PRUNE2Q8WUY3 3088 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 ARHGEF35A5YM69 484 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 USO1O60763 962 aaKnown RBP12.18□□□□□ -0.46
CAPN1-221ENST00000531068 MED24O75448 989 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-221ENST00000531068 DNAJB1P25685 340 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 HOXA11P31270 313 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-221ENST00000531068 PRPHP41219 470 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-221ENST00000531068 HYAL1Q12794 435 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 KRT79Q5XKE5 535 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 NOTUMQ6P988 496 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 DTHD1Q6ZMT9 781 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
CAPN1-221ENST00000531068 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 MINDY3Q9H8M7 445 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 NGRNQ9NPE2 291 aaKnown RBP12.18□□□□□ -0.46
CAPN1-221ENST00000531068 TLR9Q9NR96 1032 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 PCDHB6Q9Y5E3 794 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 PCDHB2Q9Y5E7 798 aa12.18□□□□□ -0.46
CAPN1-221ENST00000531068 CNTNAP2Q9UHC6 1331 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 A0A087WWV3 80 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 OFD1O75665 1012 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 CYP11B2P19099 503 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 GLRA2P23416 452 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 ADAM15Q13444 863 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 CTC1Q2NKJ3 1217 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 NOMO2Q5JPE7 1267 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 FOXD4L5Q5VV16 416 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 PTCRAQ6ISU1 281 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-221ENST00000531068 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 KCTD17Q8N5Z5 321 aa12.17□□□□□ -0.46
CAPN1-221ENST00000531068 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms