RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 EYA4O95677 639 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 HOXA11P31270 313 aaPredicted RBP20.77■□□□□ 0.91
GMDS-208ENST00000530927 CTNNB1P35222 781 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 CLLU1OSQ5K130 101 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 CABP7Q86V35 215 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 MCPH1Q8NEM0 835 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 CLIC6Q96NY7 704 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 DNM3Q9UQ16 869 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 RALGAPA2Q2PPJ7 1873 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 A0A0U1RQF3 1178 aa20.76■□□□□ 0.91
GMDS-208ENST00000530927 B4GALT5O43286 388 aa20.76■□□□□ 0.91
GMDS-208ENST00000530927 TSPAN1O60635 241 aa20.76■□□□□ 0.91
GMDS-208ENST00000530927 AMHR2Q16671 573 aa20.76■□□□□ 0.91
GMDS-208ENST00000530927 HYIQ5T013 277 aa20.76■□□□□ 0.91
GMDS-208ENST00000530927 ZNF598Q86UK7 904 aaKnown RBP20.76■□□□□ 0.91
GMDS-208ENST00000530927 CDR2LQ86X02 465 aaPredicted RBP20.76■□□□□ 0.91
GMDS-208ENST00000530927 CMTR2Q8IYT2 770 aaKnown RBP20.76■□□□□ 0.91
GMDS-208ENST00000530927 CSRNP2Q9H175 543 aa20.76■□□□□ 0.91
GMDS-208ENST00000530927 FBXO2Q9UK22 296 aaPredicted RBP20.76■□□□□ 0.91
GMDS-208ENST00000530927 TTLL13PA6NNM8 815 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 EDN1P05305 212 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 RAD51AP2Q09MP3 1159 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 TFDP1Q14186 410 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 KARSQ15046 597 aaKnown RBP20.75■□□□□ 0.91
GMDS-208ENST00000530927 TMEM119Q4V9L6 283 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 UBXN11Q5T124 520 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 LRRC55Q6ZSA7 311 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 DAW1Q8N136 415 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 CLP1Q92989 425 aaKnown RBP20.75■□□□□ 0.91
GMDS-208ENST00000530927 EPSTI1Q96J88 318 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 CASD1Q96PB1 797 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 ELAC1Q9H777 363 aaKnown RBP20.75■□□□□ 0.91
GMDS-208ENST00000530927 CHST12Q9NRB3 414 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 TFIP11Q9UBB9 837 aaKnown RBP20.75■□□□□ 0.91
GMDS-208ENST00000530927 RBM19Q9Y4C8 960 aaKnown RBP20.75■□□□□ 0.91
GMDS-208ENST00000530927 STK24Q9Y6E0 443 aa20.75■□□□□ 0.91
GMDS-208ENST00000530927 PRRC2BQ5JSZ5 2229 aaKnown RBP20.74■□□□□ 0.91
GMDS-208ENST00000530927 NPHP3-ACAD11A0A0J9YXS1 232 aa20.74■□□□□ 0.91
GMDS-208ENST00000530927 SSBP05455 408 aaKnown RBP eCLIP20.74■□□□□ 0.91
GMDS-208ENST00000530927 RINT1Q6NUQ1 792 aa20.74■□□□□ 0.91
GMDS-208ENST00000530927 IFNLR1Q8IU57 520 aaPredicted RBP20.74■□□□□ 0.91
GMDS-208ENST00000530927 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
GMDS-208ENST00000530927 EIF2AQ9BY44 585 aaKnown RBP20.74■□□□□ 0.91
GMDS-208ENST00000530927 ZSCAN16Q9H4T2 348 aaPredicted RBP20.74■□□□□ 0.91
GMDS-208ENST00000530927 FAM105AQ9NUU6 356 aa20.74■□□□□ 0.91
GMDS-208ENST00000530927 DACT1Q9NYF0 836 aa20.74■□□□□ 0.91
GMDS-208ENST00000530927 ATG2AQ2TAZ0 1938 aa20.74■□□□□ 0.91
GMDS-208ENST00000530927 HIP1RO75146 1068 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 BMP15O95972 392 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 LIG1P18858 919 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 BMPR1AP36894 532 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
GMDS-208ENST00000530927 CACNB1Q02641 598 aaPredicted RBP20.73■□□□□ 0.91
GMDS-208ENST00000530927 MAPK7Q13164 816 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 GPM6BQ13491 265 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 BECN1Q14457 450 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 C1orf186Q6ZWK4 172 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 CDK5RAP3Q96JB5 506 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 TYW1Q9NV66 732 aaKnown RBP20.73■□□□□ 0.91
GMDS-208ENST00000530927 PCDHB2Q9Y5E7 798 aa20.73■□□□□ 0.91
GMDS-208ENST00000530927 SFI1A8K8P3 1242 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 H3BNC9 293 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 GRM6O15303 877 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 ERLIN2O94905 339 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 PLA2G4BP0C869 781 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 ZSCAN22P10073 491 aaPredicted RBP20.72■□□□□ 0.91
GMDS-208ENST00000530927 ARF4P18085 180 aaPredicted RBP20.72■□□□□ 0.91
GMDS-208ENST00000530927 PLCG1P19174 1290 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 LONP1P36776 959 aaKnown RBP20.72■□□□□ 0.91
GMDS-208ENST00000530927 PBX3P40426 434 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 UBA7P41226 1012 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 SLC12A3P55017 1021 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 DHX8Q14562 1220 aaKnown RBP20.72■□□□□ 0.91
GMDS-208ENST00000530927 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
GMDS-208ENST00000530927 CHAMP1Q96JM3 812 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 AK8Q96MA6 479 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 CWH43Q9H720 699 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 ALG13Q9NP73 1137 aaKnown RBP20.72■□□□□ 0.91
GMDS-208ENST00000530927 BLOC1S4Q9NUP1 217 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 VCANP13611 3396 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 A0A0C4DFX4 3053 aa20.72■□□□□ 0.91
GMDS-208ENST00000530927 GTPBP6O43824 516 aaPredicted RBP20.71■□□□□ 0.91
GMDS-208ENST00000530927 F13A1P00488 732 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 POU3F3P20264 500 aaPredicted RBP20.71■□□□□ 0.91
GMDS-208ENST00000530927 AFF1P51825 1210 aaKnown RBP20.71■□□□□ 0.91
GMDS-208ENST00000530927 POU5F1BQ06416 359 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 SPOUT1Q5T280 376 aaKnown RBP20.71■□□□□ 0.91
GMDS-208ENST00000530927 SAMD11Q96NU1 681 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 TRAIPQ9BWF2 469 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 NFKBIZQ9BYH8 718 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 TMEM117Q9H0C3 514 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 DAXXQ9UER7 740 aaPredicted RBP20.71■□□□□ 0.91
GMDS-208ENST00000530927 HES2Q9Y543 173 aa20.71■□□□□ 0.91
GMDS-208ENST00000530927 SRPRBQ9Y5M8 271 aaKnown RBP20.71■□□□□ 0.91
GMDS-208ENST00000530927 PLXNA4Q9HCM2 1894 aa20.7■□□□□ 0.91
GMDS-208ENST00000530927 C5orf67F2Z3F1 127 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 DNAJB1P25685 340 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 SLC39A14Q15043 492 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 ARSHQ5FYA8 562 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 AGMOQ6ZNB7 445 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms