RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 BSNDQ8WZ55 320 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 USP28Q96RU2 1077 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 MTCH2Q9Y6C9 303 aa18.69■□□□□ 0.58
SF3B2-209ENST00000530322 LRRIQ4A6NIV6 560 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 TBKBP1A7MCY6 615 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 INO80B-WBP1J3KQ70 363 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 ERLIN2O94905 339 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 BMPR1AP36894 532 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 CEBPZQ03701 1054 aaKnown RBP18.68■□□□□ 0.58
SF3B2-209ENST00000530322 MBTD1Q05BQ5 628 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 AMHR2Q16671 573 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 PLIN2Q99541 437 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 FAM105AQ9NUU6 356 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 FBXO2Q9UK22 296 aaPredicted RBP18.68■□□□□ 0.58
SF3B2-209ENST00000530322 RWDD3Q9Y3V2 267 aa18.68■□□□□ 0.58
SF3B2-209ENST00000530322 MORC2Q9Y6X9 1032 aaPredicted RBP18.68■□□□□ 0.58
SF3B2-209ENST00000530322 H3BNC9 293 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 HOXA2O43364 376 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
SF3B2-209ENST00000530322 TSPAN1O60635 241 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 SKIP12755 728 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 MARCKSP29966 332 aaPredicted RBP18.67■□□□□ 0.58
SF3B2-209ENST00000530322 CTNNB1P35222 781 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 UBA7P41226 1012 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 CDCA2Q69YH5 1023 aaPredicted RBP18.67■□□□□ 0.58
SF3B2-209ENST00000530322 RINT1Q6NUQ1 792 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 KIFAP3Q92845 792 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 CDK5RAP3Q96JB5 506 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 CASD1Q96PB1 797 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 RUSC1Q9BVN2 902 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 TMEM117Q9H0C3 514 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 POLD4Q9HCU8 107 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 LMCD1Q9NZU5 365 aa18.67■□□□□ 0.58
SF3B2-209ENST00000530322 SRPRBQ9Y5M8 271 aaKnown RBP18.67■□□□□ 0.58
SF3B2-209ENST00000530322 ZNF623O75123 536 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 RB1P06400 928 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 ZSCAN22P10073 491 aaPredicted RBP18.66■□□□□ 0.58
SF3B2-209ENST00000530322 AXLP30530 894 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 NAMPTP43490 491 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 RAB27AP51159 221 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 SLC12A3P55017 1021 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 SLC39A14Q15043 492 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 UBXN11Q5T124 520 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 C1orf186Q6ZWK4 172 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 DAW1Q8N136 415 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 SYT2Q8N9I0 419 aaPredicted RBP18.66■□□□□ 0.58
SF3B2-209ENST00000530322 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 MYH11P35749 1972 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 UNC80Q8N2C7 3258 aa18.66■□□□□ 0.58
SF3B2-209ENST00000530322 ATG2AQ2TAZ0 1938 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 NASPP49321 788 aaPredicted RBP18.65■□□□□ 0.58
SF3B2-209ENST00000530322 MAPK7Q13164 816 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 GPM6BQ13491 265 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 PKP1Q13835 747 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 PPP2R5AQ15172 486 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 CCDC85BQ15834 202 aaPredicted RBP18.65■□□□□ 0.58
SF3B2-209ENST00000530322 FOXD4L5Q5VV16 416 aaPredicted RBP18.65■□□□□ 0.58
SF3B2-209ENST00000530322 LRRC15Q8TF66 581 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 FOXD4L4Q8WXT5 416 aaPredicted RBP18.65■□□□□ 0.58
SF3B2-209ENST00000530322 PPM1EQ8WY54 764 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 CPB2Q96IY4 423 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 IFT74Q96LB3 600 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 PLVAPQ9BX97 442 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 CCSER1Q9C0I3 900 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 C2orf40Q9H1Z8 148 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 TYW1Q9NV66 732 aaKnown RBP18.65■□□□□ 0.58
SF3B2-209ENST00000530322 HCSTQ9UBK5 93 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 PCDHB2Q9Y5E7 798 aa18.65■□□□□ 0.58
SF3B2-209ENST00000530322 B4GALT5O43286 388 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 HIP1RO75146 1068 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 F13A1P00488 732 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 PLA2G4BP0C869 781 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 ARF4P18085 180 aaPredicted RBP18.64■□□□□ 0.57
SF3B2-209ENST00000530322 GUCY2CP25092 1073 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 NCBP1Q09161 790 aaKnown RBP18.64■□□□□ 0.57
SF3B2-209ENST00000530322 KARSQ15046 597 aaKnown RBP18.64■□□□□ 0.57
SF3B2-209ENST00000530322 FAM187BQ17R55 369 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 SPECC1Q5M775 1068 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 NOTUMQ6P988 496 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 LRRC55Q6ZSA7 311 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 USP49Q70CQ1 688 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 MRPL10Q7Z7H8 261 aaKnown RBP18.64■□□□□ 0.57
SF3B2-209ENST00000530322 ZBTB8OSQ8IWT0 167 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 ABI1Q8IZP0 508 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 DEPTORQ8TB45 409 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 HELQQ8TDG4 1101 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 LPPQ93052 612 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 P2RX5Q93086 422 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 CCDC51Q96ER9 411 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 CLIC6Q96NY7 704 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 C11orf84Q9BUA3 381 aaPredicted RBP18.64■□□□□ 0.57
SF3B2-209ENST00000530322 TIPINQ9BVW5 301 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 CCDC113Q9H0I3 377 aa18.64■□□□□ 0.57
SF3B2-209ENST00000530322 FZD8Q9H461 694 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms