RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 B4E1Z4 1266 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 MPHOSPH10O00566 681 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 CXCL11O14625 94 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 NMT2O60551 498 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 ANTXR2P58335 489 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 CHMP4BP1P59074 171 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 ICA1Q05084 483 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 TAF1CQ15572 869 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 CLEC16AQ2KHT3 1053 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 ADCK5Q3MIX3 580 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 CYB5R4Q7L1T6 521 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 PRRT2Q7Z6L0 340 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 ZNF444Q8N0Y2 327 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 IL17RAQ96F46 866 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 CEP95Q96GE4 821 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 ASCC2Q9H1I8 757 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 CABP5Q9NP86 173 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 PARD6AQ9NPB6 346 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 SNX14Q9Y5W7 946 aa10.27□□□□□ -0.77
CCDC90B-217ENST00000530253 TSPY2A6NKD2 308 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 HOXA5P20719 270 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 SPP2Q13103 211 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 RAB3GAP1Q15042 981 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 TIGD5Q53EQ6 642 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 RRP12Q5JTH9 1297 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 MEI1Q5TIA1 1274 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 TCERG1LQ5VWI1 586 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 PHC3Q8NDX5 983 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 BRI3BPQ8WY22 251 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 ESR2Q92731 530 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 C12orf42Q96LP6 360 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 KRT23Q9C075 422 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 CNNM2Q9H8M5 875 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 TCP11L1Q9NUJ3 509 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 MTMR4Q9NYA4 1195 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 NYAP2Q9P242 653 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 TLR6Q9Y2C9 796 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 CORINQ9Y5Q5 1042 aa10.26□□□□□ -0.77
CCDC90B-217ENST00000530253 MYOCOSA0A1B0GUC4 107 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 TRIM75PA6NK02 468 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 RANBP6O60518 1105 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 CILPO75339 1184 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 BUD31P41223 144 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 BACE1P56817 501 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 SNAPC2Q13487 334 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 SEC23AQ15436 765 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 KIAA1755Q5JYT7 1200 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 MKL1Q969V6 931 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 CCDC74BQ96LY2 380 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 KREMEN1Q96MU8 473 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 PTPN18Q99952 460 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 KIAA1683Q9H0B3 1180 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 ZCCHC4Q9H5U6 513 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 AS3MTQ9HBK9 375 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 RNF186Q9NXI6 227 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 TMX2Q9Y320 296 aa10.25□□□□□ -0.77
CCDC90B-217ENST00000530253 CCL15-CCL14A0A0B4J2E2 113 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 MANSC4A6NHS7 340 aaPredicted RBP10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 UPK3BL1B0FP48 263 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 UPK3BL2E5RIL1 263 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 GTF2A2P52657 109 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 HMGCS2P54868 508 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 TEKQ02763 1124 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 CCL15Q16663 113 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 NCOA7Q8NI08 942 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 ENOX1Q8TC92 643 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 BACH2Q9BYV9 841 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 SYNPO2Q9UMS6 1093 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 TNKSO95271 1327 aa10.24□□□□□ -0.77
CCDC90B-217ENST00000530253 OR14I1A6ND48 311 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 C19orf81C9J6K1 198 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 BTBD19C9JJ37 291 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 HRKO00198 91 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 EIF5BO60841 1220 aaKnown RBP10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 TTLL1O95922 423 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 CETPP11597 493 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 ZKSCAN1P17029 563 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 VCAM1P19320 739 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 TM4SF4P48230 202 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 EXOSC10Q01780 885 aaKnown RBP10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 LMNB2Q03252 620 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 TRDNQ13061 729 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 KRT32Q14532 448 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 TREML2Q5T2D2 321 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 RASGRP2Q7LDG7 609 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 DGKHQ86XP1 1220 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 LRRC47Q8N1G4 583 aaKnown RBP10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 ENAHQ8N8S7 591 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 GATAD2BQ8WXI9 593 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 RELTQ969Z4 430 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 NEK1Q96PY6 1258 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms