RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 POLD4Q9HCU8 107 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 AGPAT5Q9NUQ2 364 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 PIN4Q9Y237 131 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 ZDHHC9Q9Y397 364 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 COL4A6Q14031 1691 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 EPOPA6NHQ4 379 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 INO80B-WBP1J3KQ70 363 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 SPTLC2O15270 562 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 PPP6R2O75170 966 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 YEATS4O95619 227 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 BRD1O95696 1058 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 EOMESO95936 686 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 SLC12A3P55017 1021 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 BTG3Q14201 252 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 PPP2R5AQ15172 486 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 FOXD4L6Q3SYB3 417 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 CDCA2Q69YH5 1023 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 FOXD4L3Q6VB84 417 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 ZNF598Q86UK7 904 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 CMTR2Q8IYT2 770 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 LRRC15Q8TF66 581 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 TIPINQ9BVW5 301 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 ADGRA3Q8IWK6 1321 aa14.03□□□□□ -0.16
CCDC90B-216ENST00000529856 RFXAPO00287 272 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 TSPAN1O60635 241 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 ZNF623O75123 536 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 HIP1RO75146 1068 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 ERLIN2O94905 339 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 SSBP05455 408 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 SKIP12755 728 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 PLCG1P19174 1290 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 GUCY2CP25092 1073 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 AXLP30530 894 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 NAMPTP43490 491 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 GATMP50440 423 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 ADGRE1Q14246 886 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 AMHR2Q16671 573 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 TWF2Q6IBS0 349 aaKnown RBP14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 ZBTB8OSQ8IWT0 167 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 DAW1Q8N136 415 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 RASSF8Q8NHQ8 419 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 SYMPKQ92797 1274 aaKnown RBP14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 IFT74Q96LB3 600 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 GAS2L1Q99501 681 aaPredicted RBP14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 C17orf80Q9BSJ5 609 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 C2orf40Q9H1Z8 148 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 FZD8Q9H461 694 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 BLOC1S4Q9NUP1 217 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 RNF19AQ9NV58 838 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 DAXXQ9UER7 740 aaPredicted RBP14.02□□□□□ -0.17
CCDC90B-216ENST00000529856 HOXA2O43364 376 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 LINC00271P0C7V0 271 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 FGFR1P11362 822 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 FOSL2P15408 326 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 ATF7P17544 494 aaPredicted RBP14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 DDIT3P35638 169 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 MAPK7Q13164 816 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 FAM187BQ17R55 369 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 PAN2Q504Q3 1202 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 EPC2Q52LR7 807 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 TMEM192Q8IY95 271 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 DEPTORQ8TB45 409 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 RAD54LQ92698 747 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 CLP1Q92989 425 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 DRC1Q96MC2 740 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 C17orf75Q9HAS0 396 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 FAM105AQ9NUU6 356 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 CCDC39Q9UFE4 941 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 CFAP45Q9UL16 551 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 MTUS1Q9ULD2 1270 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 FNDC1Q4ZHG4 1894 aaPredicted RBP14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 CDH23Q9H251 3354 aa14.01□□□□□ -0.17
CCDC90B-216ENST00000529856 TBKBP1A7MCY6 615 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 CUTAO60888 179 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 ARF4P18085 180 aaPredicted RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 POU3F3P20264 500 aaPredicted RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 TXLNAP40222 546 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 NPTX2P47972 431 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 RAB27AP51159 221 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 EFNA5P52803 228 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 PEX3P56589 373 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 DNM1Q05193 864 aaKnown RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 MCM6Q14566 821 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 NOTUMQ6P988 496 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 MRPL10Q7Z7H8 261 aaKnown RBP14□□□□□ -0.17
CCDC90B-216ENST00000529856 RNF169Q8NCN4 708 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 FBXO22Q8NEZ5 403 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 KCNG4Q8TDN1 519 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 CCDC51Q96ER9 411 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 CPB2Q96IY4 423 aa14□□□□□ -0.17
CCDC90B-216ENST00000529856 PRIMPOLQ96LW4 560 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms