RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 SLC39A11Q8N1S5 342 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 PRPF31Q8WWY3 499 aaKnown RBP14.54□□□□□ -0.08
CPSF1-204ENST00000529288 HAS1Q92839 578 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 TMEM169Q96HH4 297 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 LXNQ9BS40 222 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 PHF7Q9BWX1 381 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-204ENST00000529288 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 WRAP73Q9P2S5 460 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-204ENST00000529288 KIAA1671Q9BY89 1806 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 FSD2A1L4K1 749 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 ZBTB39O15060 712 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 LARGE1O95461 756 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 YWHABP31946 246 aaKnown RBP14.53□□□□□ -0.08
CPSF1-204ENST00000529288 ANAPC15P60006 121 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 BMS1Q14692 1282 aaKnown RBP14.53□□□□□ -0.08
CPSF1-204ENST00000529288 ME3Q16798 604 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 HERC4Q5GLZ8 1057 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-204ENST00000529288 NOMO2Q5JPE7 1267 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 PSPC1Q8WXF1 523 aaKnown RBP14.53□□□□□ -0.08
CPSF1-204ENST00000529288 AUTS2Q8WXX7 1259 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
CPSF1-204ENST00000529288 MEIS3P2A8K0S8 358 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 LOC730098B7Z3J9 87 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 TBX3O15119 743 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 FDPSP14324 419 aaKnown RBP14.52□□□□□ -0.09
CPSF1-204ENST00000529288 ATP2B1P20020 1258 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 RFC5P40937 340 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 NEK4P51957 841 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 LAMTOR4Q0VGL1 99 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 TRIM29Q14134 588 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 CALCRLQ16602 461 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 HFE2Q6ZVN8 426 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 C4orf19Q8IY42 314 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 EXOC8Q8IYI6 725 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 SLFN12Q8IYM2 578 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 MRPL43Q8N983 215 aaKnown RBP14.52□□□□□ -0.09
CPSF1-204ENST00000529288 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 CASP10Q92851 521 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 CCDC43Q96MW1 224 aaKnown RBP14.52□□□□□ -0.09
CPSF1-204ENST00000529288 ZSWIM4Q9H7M6 989 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 NRDE2Q9H7Z3 1164 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 PCDHB2Q9Y5E7 798 aa14.52□□□□□ -0.09
CPSF1-204ENST00000529288 MYH9P35579 1960 aaKnown RBP14.52□□□□□ -0.09
CPSF1-204ENST00000529288 ATG2AQ2TAZ0 1938 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 PLXNA4Q9HCM2 1894 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 C2orf71A6NGG8 1288 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 JAK2O60674 1132 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 CLASP2O75122 1294 aaKnown RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 OFD1O75665 1012 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 TXKP42681 527 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 RAB27AP51159 221 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 CBX2Q14781 532 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 EMC2Q15006 297 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 SYCE2Q6PIF2 218 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 SRGAP1Q7Z6B7 1085 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 ZBTB33Q86T24 672 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 TMEM173Q86WV6 379 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 URGCPQ8TCY9 931 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 TCP11Q8WWU5 503 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 EDAQ92838 391 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 GTF3C6Q969F1 213 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 FAM193BQ96PV7 902 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 MTRQ99707 1265 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 EIF2AK1Q9BQI3 630 aaKnown RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 DHX33Q9H6R0 707 aaKnown RBP14.51□□□□□ -0.09
CPSF1-204ENST00000529288 IFT122Q9HBG6 1241 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 AGPAT5Q9NUQ2 364 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 TBC1D13Q9NVG8 400 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 CDH22Q9UJ99 828 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 PCDHA12Q9UN75 941 aa14.51□□□□□ -0.09
CPSF1-204ENST00000529288 FNDC1Q4ZHG4 1894 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-204ENST00000529288 A0A087WWV3 80 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 ERLIN2O94905 339 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
CPSF1-204ENST00000529288 GALTP07902 379 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 SLC11A1P49279 550 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 GUCY1B3Q02153 619 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 TPRNQ4KMQ1 711 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 CES5AQ6NT32 575 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 TMEM184AQ6ZMB5 413 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 FERMT3Q86UX7 667 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 ZNF280BQ86YH2 543 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 DIS3L2Q8IYB7 885 aaKnown RBP14.5□□□□□ -0.09
CPSF1-204ENST00000529288 SUSD6Q92537 303 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 MFSD14AQ96MC6 490 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 TRAIPQ9BWF2 469 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 S1PR5Q9H228 398 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 MINDY3Q9H8M7 445 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 DNAJB4Q9UDY4 337 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 ARIH1Q9Y4X5 557 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-204ENST00000529288 PPME1Q9Y570 386 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 HCFC2Q9Y5Z7 792 aa14.5□□□□□ -0.09
CPSF1-204ENST00000529288 TMEM221A6NGB7 291 aa14.49□□□□□ -0.09
CPSF1-204ENST00000529288 INO80B-WBP1J3KQ70 363 aa14.49□□□□□ -0.09
CPSF1-204ENST00000529288 M0R296 226 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms