RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 PDE1BQ01064 536 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 DHX9Q08211 1270 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 KRT72Q14CN4 511 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 RCN1Q15293 331 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 MAP7D1Q3KQU3 841 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ZC2HC1CQ53FD0 456 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 KLHDC7AQ5VTJ3 777 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SLC17A8Q8NDX2 589 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SEC14L1Q92503 715 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 HAUS1Q96CS2 278 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 ZIC5Q96T25 663 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 EIF2AQ9BY44 585 aaKnown RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 TXLNGQ9NUQ3 528 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 FBXO2Q9UK22 296 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-203ENST00000529167 PNMA3Q9UL41 463 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
C11orf88-203ENST00000529167 SIPA1L3O60292 1781 aaPredicted RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 ZNF609O15014 1411 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 CFAP69A5D8W1 941 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 CES2O00748 559 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TRAFD1O14545 582 aaPredicted RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 RAD51CO43502 376 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 SH3BP5O60239 455 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 STARD3NLO95772 234 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 CXCR5P32302 372 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 STX17P56962 302 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 ITGA9Q13797 1035 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 GIT2Q14161 759 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TNFAIP8L3Q5GJ75 292 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TMC3Q7Z5M5 1100 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 AACSQ86V21 672 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 JDP2Q8WYK2 163 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 GFM2Q969S9 779 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 CEP295NLQ96MC4 621 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TXLNGYQ9BZA5 131 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TLE6Q9H808 572 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 FAIMQ9NVQ4 179 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 PTTG2Q9NZH5 202 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 NDUFA13Q9P0J0 144 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 SEC63Q9UGP8 760 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 FBXL5Q9UKA1 691 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 VAV1P15498 845 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TXKP42681 527 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 RTP1P59025 263 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 UBXN1Q04323 297 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 KRT71Q3SY84 523 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 MCMDC2Q4G0Z9 681 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 DAAM2Q86T65 1068 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 SPATA24Q86W54 205 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 DZIP1Q86YF9 867 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 ANKRD13BQ86YJ7 626 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 SCG3Q8WXD2 468 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 EAF2Q96CJ1 260 aaPredicted RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 PRMT1Q99873 361 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TCHPQ9BT92 498 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 DDX23Q9BUQ8 820 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TIMMDC1Q9NPL8 285 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 HOXC10Q9NYD6 342 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
C11orf88-203ENST00000529167 NR2E3Q9Y5X4 410 aa8.59□□□□□ -1.03
C11orf88-203ENST00000529167 RIC1Q4ADV7 1423 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 SMIM31A0A1B0GVY4 71 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 LGALS16A8MUM7 142 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 KCNJ18B7U540 433 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 RNMTO43148 476 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 AKR1B10O60218 316 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 BBOX1O75936 387 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 MOCS3O95396 460 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 EYA4O95677 639 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 NUDT17P0C025 328 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 CCT8P50990 548 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 KCNJ12Q14500 433 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 PDCD4Q53EL6 469 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 FIGNQ5HY92 759 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 SNX30Q5VWJ9 437 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 MARK2Q7KZI7 788 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 GRAMD1CQ8IYS0 662 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 KRT12Q99456 494 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 DSCC1Q9BVC3 393 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 DHX36Q9H2U1 1008 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 GJB4Q9NTQ9 266 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 INTS9Q9NV88 658 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 RNF186Q9NXI6 227 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 QPCTLQ9NXS2 382 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 GPRC5DQ9NZD1 345 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 TSPYL4Q9UJ04 414 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 PCDHA13Q9Y5I0 950 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 FADS3Q9Y5Q0 445 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 A0A1W2PQJ5 194 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 E7EWF7 191 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 TRIM21P19474 475 aaKnown RBP8.58□□□□□ -1.04
C11orf88-203ENST00000529167 CTDSPL2Q05D32 466 aa8.58□□□□□ -1.04
C11orf88-203ENST00000529167 DPYDQ12882 1025 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms