RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 CHST12Q9NRB3 414 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 FAM105AQ9NUU6 356 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 SPG21Q9NZD8 308 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 LZTS1Q9Y250 596 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 KIAA1671Q9BY89 1806 aa12.94□□□□□ -0.34
SRPRA-203ENST00000528744 MYH9P35579 1960 aaKnown RBP12.94□□□□□ -0.34
SRPRA-203ENST00000528744 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 C2orf71A6NGG8 1288 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 TBX3O15119 743 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 ZNF623O75123 536 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 CDKL5O76039 1030 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 DDHD2O94830 711 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 GALTP07902 379 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 YWHABP31946 246 aaKnown RBP12.93□□□□□ -0.34
SRPRA-203ENST00000528744 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 CBX2Q14781 532 aaPredicted RBP12.93□□□□□ -0.34
SRPRA-203ENST00000528744 HERC4Q5GLZ8 1057 aaPredicted RBP12.93□□□□□ -0.34
SRPRA-203ENST00000528744 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 HFE2Q6ZVN8 426 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 TMC7Q7Z402 723 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 MRPL10Q7Z7H8 261 aaKnown RBP12.93□□□□□ -0.34
SRPRA-203ENST00000528744 ZNF410Q86VK4 478 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 LXNQ9BS40 222 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 MIOSQ9NXC5 875 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 PIN4Q9Y237 131 aaKnown RBP12.93□□□□□ -0.34
SRPRA-203ENST00000528744 FAM50BQ9Y247 325 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 COL4A3BPQ9Y5P4 624 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 PLXNA4Q9HCM2 1894 aa12.93□□□□□ -0.34
SRPRA-203ENST00000528744 HOXA2O43364 376 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 TECTAO75443 2155 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 CXCL14O95715 111 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 GCFC2P16383 781 aaKnown RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 KRT2P35908 639 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 TECP42680 631 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 SLC11A1P49279 550 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 DNM2P50570 870 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 NEK4P51957 841 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 CDC42EP1Q00587 391 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 XKR9Q5GH70 373 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 TWF2Q6IBS0 349 aaKnown RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 CATSPER4Q7RTX7 472 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 ABI1Q8IZP0 508 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 C12orf76Q8N812 135 aaPredicted RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 SMG8Q8ND04 991 aaKnown RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 RPGRIP1Q96KN7 1286 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 EIF2AK1Q9BQI3 630 aaKnown RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 DACT1Q9NYF0 836 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
SRPRA-203ENST00000528744 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
SRPRA-203ENST00000528744 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 GUCY1B3Q02153 619 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 NOMO2Q5JPE7 1267 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 PDE12Q6L8Q7 609 aaKnown RBP12.91□□□□□ -0.34
SRPRA-203ENST00000528744 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
SRPRA-203ENST00000528744 IGSF21Q96ID5 467 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 CDCA3Q99618 268 aaPredicted RBP12.91□□□□□ -0.34
SRPRA-203ENST00000528744 PHF7Q9BWX1 381 aaPredicted RBP12.91□□□□□ -0.34
SRPRA-203ENST00000528744 EIF2AQ9BY44 585 aaKnown RBP12.91□□□□□ -0.34
SRPRA-203ENST00000528744 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
SRPRA-203ENST00000528744 ENTPD7Q9NQZ7 604 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 AGPAT5Q9NUQ2 364 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 HCFC2Q9Y5Z7 792 aa12.91□□□□□ -0.34
SRPRA-203ENST00000528744 WDR81Q562E7 1941 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRPRA-203ENST00000528744 NEFLP07196 543 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 XBP1P17861 261 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 SFPQP23246 707 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRPRA-203ENST00000528744 ARL2P36404 184 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 TXKP42681 527 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 POLGP54098 1239 aaPredicted RBP12.9□□□□□ -0.34
SRPRA-203ENST00000528744 KRT17Q04695 432 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 EMC2Q15006 297 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 ANKRD1Q15327 319 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 AMHR2Q16671 573 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 TAS1R1Q7RTX1 841 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 VPS52Q8N1B4 723 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 RNF149Q8NC42 400 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 EDAQ92838 391 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 KIF2CQ99661 725 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
SRPRA-203ENST00000528744 GBP3Q9H0R5 595 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 ZBP1Q9H171 429 aa12.9□□□□□ -0.34
SRPRA-203ENST00000528744 PCDHA12Q9UN75 941 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms