RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 HAUS6Q7Z4H7 955 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 RSPH3Q86UC2 560 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 DEPTORQ8TB45 409 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 MINDY3Q9H8M7 445 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 ARHGAP28Q9P2N2 729 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 MAPK8IP1Q9UQF2 711 aa13.4□□□□□ -0.26
TRAF3IP2-211ENST00000528599 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 DCDC2CA8MYV0 355 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 H0YGN5 161 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CSDE1O75534 798 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GCNT3O95395 438 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CHRNA1P02708 482 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CTSHP09668 335 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SYN1P17600 705 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 NLRP12P59046 1061 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 POU5F1BQ06416 359 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MGAT3Q09327 533 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KCNA1Q09470 495 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TAS1R3Q7RTX0 852 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZNF410Q86VK4 478 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SCFD1Q8WVM8 642 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 OSMRQ99650 979 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
TRAF3IP2-211ENST00000528599 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PRPF6O94906 941 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 RPLP2P05387 115 aaKnown RBP13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 IQCF3P0C7M6 154 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CKBP12277 381 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ITGB8P26012 769 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 HOXD13P35453 343 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PRCPP42785 496 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PHKA2P46019 1235 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GTF2BQ00403 316 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CDC42EP1Q00587 391 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TYRO3Q06418 890 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 RBL2Q08999 1139 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FAM26DQ5JW98 314 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TRAF7Q6Q0C0 670 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SCLT1Q96NL6 688 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 NFKBIZQ9BYH8 718 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CCDC113Q9H0I3 377 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZMYND8Q9ULU4 1186 aaPredicted RBP13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TRPV2Q9Y5S1 764 aa13.38□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 EDN1P05305 212 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CRYBB1P53674 252 aaPredicted RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MBTD1Q05BQ5 628 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZBTB8OSQ8IWT0 167 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SLC17A8Q8NDX2 589 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CAGE1Q8TC20 777 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZNF507Q8TCN5 953 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KCNN1Q92952 543 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 NOC4LQ9BVI4 516 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 IKZF4Q9H2S9 585 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TBX21Q9UL17 535 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 USP20Q9Y2K6 914 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 H0YCG3 227 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 K7ERI5 159 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 M0QZ92 97 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 EIF3DO15371 548 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CAND2O75155 1236 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FGFR4P22455 802 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 EIF4BP23588 611 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 EFNA5P52803 228 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 BFSP2Q13515 415 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 STX1AQ16623 288 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 NELFCDQ8IXH7 590 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MYOCDQ8IZQ8 938 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GUF1Q8N442 669 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MLKLQ8NB16 471 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TBX20Q9UMR3 447 aa13.37□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PHLPP2Q6ZVD8 1323 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TTLL13PA6NNM8 815 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms