RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 RANBP17Q9H2T7 1088 aaKnown RBP4.37□□□□□ -1.71
C11orf54-204ENST00000527003 FOXP1Q9H334 677 aaPredicted RBP4.37□□□□□ -1.71
C11orf54-204ENST00000527003 RPAP3Q9H6T3 665 aaPredicted RBP4.37□□□□□ -1.71
C11orf54-204ENST00000527003 JMJD4Q9H9V9 463 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 ZFYVE1Q9HBF4 777 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 C6orf50Q9HD87 102 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 RNF19AQ9NV58 838 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 BARHL2Q9NY43 387 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 MAP3K20Q9NYL2 800 aaKnown RBP4.37□□□□□ -1.71
C11orf54-204ENST00000527003 CRIM1Q9NZV1 1036 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 ADAMTS5Q9UNA0 930 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 AGTPBP1Q9UPW5 1226 aa4.37□□□□□ -1.71
C11orf54-204ENST00000527003 MRPL11Q9Y3B7 192 aaKnown RBP4.37□□□□□ -1.71
C11orf54-204ENST00000527003 BAZ2AQ9UIF9 1905 aaKnown RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 LAMB1P07942 1786 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 VPS37CA5D8V6 355 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 GOLGA6L22H0YM25 854 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 VWA5AO00534 786 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ENC1O14682 589 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CYTH3O43739 400 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 BMP15O95972 392 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 FOSP01100 380 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 MMP1P03956 469 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ICAM1P05362 532 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 U2AF2P26368 475 aaKnown RBP eCLIP4.36□□□□□ -1.718e-9■■■■□ 20.1
C11orf54-204ENST00000527003 GSTT1P30711 240 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 KRT2P35908 639 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 GCLCP48506 637 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 TRAPPC10P48553 1259 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 NAPAP54920 295 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 NLRP5P59047 1200 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CCNA1P78396 465 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 IRX3P78415 501 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ID3Q02535 119 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PPP2R3AQ06190 1150 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ZNF252P-AS1Q0IIN9 211 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 SREBF2Q12772 1141 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ZYXQ15942 572 aaKnown RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CDC37Q16543 378 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 SHROOM1Q2M3G4 852 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 KRT40Q6A162 431 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ALG1LQ6GMV1 187 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 TTBK2Q6IQ55 1244 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 RGMBQ6NW40 437 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 SLC23A3Q6PIS1 610 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CLEC17AQ6ZS10 378 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 HEATR3Q7Z4Q2 680 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ANKRD23Q86SG2 305 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 RAB11FIP4Q86YS3 637 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 GRIN3AQ8TCU5 1115 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CUL5Q93034 780 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CLMNQ96JQ2 1002 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ZNF396Q96N95 335 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 NECAB3Q96P71 396 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 GBP4Q96PP9 640 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 FANCD2OSQ96PS1 177 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PIGSQ96S52 555 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PARK7Q99497 189 aaKnown RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 NAP1L4Q99733 375 aaKnown RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PHF20Q9BVI0 1012 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 TEX13BQ9BXU2 312 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 UBA5Q9GZZ9 404 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ZMYND12Q9H0C1 365 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PSTPIP2Q9H939 334 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 SLC38A10Q9HBR0 1119 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 VAT1LQ9HCJ6 419 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 RIC8AQ9NPQ8 531 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 FBXO40Q9UH90 709 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 CFAP45Q9UL16 551 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ABT1Q9ULW3 272 aaKnown RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PCDHA4Q9UN74 947 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 MTMR6Q9Y217 621 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 RABGAP1Q9Y3P9 1069 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 PCDHA1Q9Y5I3 950 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ECM29Q5VYK3 1845 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ABCB11O95342 1321 aa4.36□□□□□ -1.71
C11orf54-204ENST00000527003 FRMPD2Q68DX3 1309 aaPredicted RBP4.36□□□□□ -1.71
C11orf54-204ENST00000527003 ADAMTSL1Q8N6G6 1762 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 PAPPA2Q9BXP8 1791 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 CCL15-CCL14A0A0B4J2E2 113 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 CCDC194A0A1B0GVG4 234 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 SMCO2A6NFE2 343 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 B4DLN1 442 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 STXBP3O00186 592 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 SLC25A27O95847 323 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 F13A1P00488 732 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 CELA3AP09093 270 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 USP17L7P0C7H9 530 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 NME2P22392 152 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 ARNTP27540 789 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 SLC16A2P36021 539 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 STAT3P40763 770 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 ADCY7P51828 1080 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 NOGQ13253 232 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 ORC2Q13416 577 aaPredicted RBP4.35□□□□□ -1.71
C11orf54-204ENST00000527003 CCL15Q16663 113 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 IFI16Q16666 785 aaKnown RBP4.35□□□□□ -1.71
C11orf54-204ENST00000527003 QRICH1Q2TAL8 776 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 RILPL1Q5EBL4 403 aa4.35□□□□□ -1.71
C11orf54-204ENST00000527003 KIAA1755Q5JYT7 1200 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms