RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 SUSD6Q92537 303 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 EDAQ92838 391 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 HAS1Q92839 578 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 SH2D3AQ9BRG2 576 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 DHX33Q9H6R0 707 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 IFT122Q9HBG6 1241 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 BRMS1Q9HCU9 246 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 STK39Q9UEW8 545 aa12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 PIN4Q9Y237 131 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-204ENST00000526545 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 LARGE1O95461 756 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 CTDNEP1O95476 244 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 POLGP54098 1239 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 BCAR1P56945 870 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 GIT2Q14161 759 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 PCBP1Q15365 356 aaKnown RBP eCLIP12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 ANKRD54Q6NXT1 300 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 SRGAP1Q7Z6B7 1085 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 TCP11Q8WWU5 503 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 PRPF31Q8WWY3 499 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 PSPC1Q8WXF1 523 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 PGBD4Q96DM1 585 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 MFSD14AQ96MC6 490 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 NLRP4Q96MN2 994 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 MUTYHQ9UIF7 546 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 KIF3AQ9Y496 699 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 COL4A3BPQ9Y5P4 624 aa12.41□□□□□ -0.42
AMBRA1-204ENST00000526545 TRIOO75962 3097 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 HIDE1A8MVS5 230 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 KRT2P35908 639 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 PBX3P40426 434 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 TECP42680 631 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 NPEPPSP55786 919 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 TRIM29Q14134 588 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 NOMO2Q5JPE7 1267 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 PLA2G4FQ68DD2 849 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 KSR1Q8IVT5 923 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 CASP10Q92851 521 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 LXNQ9BS40 222 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 S1PR5Q9H228 398 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 AGPAT5Q9NUQ2 364 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
AMBRA1-204ENST00000526545 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 C2orf71A6NGG8 1288 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 OFD1O75665 1012 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 CXCL14O95715 111 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 FDPSP14324 419 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 RBM10P98175 930 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 RNASELQ05823 741 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 ITIH3Q06033 890 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 SPIRE1Q08AE8 756 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 MXD4Q14582 209 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 BMP8AQ7Z5Y6 402 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 MRPL10Q7Z7H8 261 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 DDX53Q86TM3 631 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 UBN1Q9NPG3 1134 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 WRAP73Q9P2S5 460 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 IRAK3Q9Y616 596 aa12.39□□□□□ -0.43
AMBRA1-204ENST00000526545 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 SLITRK3O94933 977 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 LYPLA2O95372 231 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 POU5F1BQ06416 359 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 NCBP1Q09161 790 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 EMC2Q15006 297 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 CES5AQ6NT32 575 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 LLGL2Q6P1M3 1020 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 SYCE2Q6PIF2 218 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 HFE2Q6ZVN8 426 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 VPS52Q8N1B4 723 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 TMEM87AQ8NBN3 555 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms