RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 MBTD1Q05BQ5 628 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 KARSQ15046 597 aaKnown RBP17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 KRI1Q8N9T8 703 aaKnown RBP17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 RASSF8Q8NHQ8 419 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 IFT74Q96LB3 600 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 C17orf80Q9BSJ5 609 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 AGPAT5Q9NUQ2 364 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.46
SSSCA1-202ENST00000526433 SPTLC2O15270 562 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 ERLIN2O94905 339 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 BRD1O95696 1058 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 EOMESO95936 686 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 FOSL2P15408 326 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 SLC12A3P55017 1021 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 NCBP1Q09161 790 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 ADGRE1Q14246 886 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 PPP2R5AQ15172 486 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 PCBP1Q15365 356 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 PAN2Q504Q3 1202 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 TMEM192Q8IY95 271 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 CMTR2Q8IYT2 770 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 RNF169Q8NCN4 708 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 LRRC15Q8TF66 581 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 BLOC1S4Q9NUP1 217 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 ZDHHC9Q9Y397 364 aa17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 FNDC1Q4ZHG4 1894 aaPredicted RBP17.95■□□□□ 0.46
SSSCA1-202ENST00000526433 TBKBP1A7MCY6 615 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 TSPAN1O60635 241 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 HIP1RO75146 1068 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 PPP6R2O75170 966 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 YEATS4O95619 227 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 FGFR1P11362 822 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 SKIP12755 728 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 PLCG1P19174 1290 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 IGFBP4P22692 258 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 NAMPTP43490 491 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 DHX8Q14562 1220 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 AMHR2Q16671 573 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 EPC2Q52LR7 807 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 DAW1Q8N136 415 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 SYMPKQ92797 1274 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 C2orf40Q9H1Z8 148 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 FAM105AQ9NUU6 356 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
SSSCA1-202ENST00000526433 SFI1A8K8P3 1242 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 ZNF623O75123 536 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 GUCY2CP25092 1073 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 AXLP30530 894 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 DDIT3P35638 169 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 RAD51AP2Q09MP3 1159 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 MCM6Q14566 821 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 ARSHQ5FYA8 562 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 UBXN11Q5T124 520 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 CDCA2Q69YH5 1023 aaPredicted RBP17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 FBXO22Q8NEZ5 403 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 DEPTORQ8TB45 409 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 RAD54LQ92698 747 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 CLP1Q92989 425 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 CPB2Q96IY4 423 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 DRC1Q96MC2 740 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 TIPINQ9BVW5 301 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 FZD8Q9H461 694 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 PCDHB2Q9Y5E7 798 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 MRPL42Q9Y6G3 142 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 TRANK1O15050 2925 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 COL4A6Q14031 1691 aa17.93■□□□□ 0.46
SSSCA1-202ENST00000526433 NLRC5Q86WI3 1866 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 CDH23Q9H251 3354 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 MYH11P35749 1972 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 NPHP3-ACAD11A0A0J9YXS1 232 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 HOXA2O43364 376 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 LINC00271P0C7V0 271 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 ARF4P18085 180 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 BMPR1AP36894 532 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 TXLNAP40222 546 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 RAB27AP51159 221 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 PEX3P56589 373 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 DNM1Q05193 864 aaKnown RBP17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 MAPK7Q13164 816 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 NOTUMQ6P988 496 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 CASD1Q96PB1 797 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 PANK2Q9BZ23 570 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 TMEM117Q9H0C3 514 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 PRMT7Q9NVM4 692 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 KCND2Q9NZV8 630 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 CFAP45Q9UL16 551 aa17.92■□□□□ 0.46
SSSCA1-202ENST00000526433 PRRC2BQ5JSZ5 2229 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 CCDC169A6NNP5 214 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 B4GALT5O43286 388 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 LPXNO60711 386 aa17.91■□□□□ 0.46
SSSCA1-202ENST00000526433 RB1P06400 928 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms