RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TRPV2Q9Y5S1 764 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 FRYQ5TBA9 3013 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 SETXQ7Z333 2677 aaKnown RBP12.3□□□□□ -0.44
NEDD8-204ENST00000526430 KRBA1A5PL33 1030 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 C2orf71A6NGG8 1288 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 SPATA31C2B4DYI2 1134 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 M0QZ92 97 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 ZZEF1O43149 2961 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 FIBPO43427 364 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 CLASP2O75122 1294 aaKnown RBP12.3□□□□□ -0.44
NEDD8-204ENST00000526430 WEE2P0C1S8 567 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 XBP1P17861 261 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 USP11P51784 963 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 KRT17Q04695 432 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 ZNF528Q3MIS6 628 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 RARS2Q5T160 578 aaKnown RBP12.3□□□□□ -0.44
NEDD8-204ENST00000526430 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 PIK3AP1Q6ZUJ8 805 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 TMC7Q7Z402 723 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 COL26A1Q96A83 441 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 MXRA8Q9BRK3 442 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 JADE2Q9NQC1 790 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 C1orf112Q9NSG2 853 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
NEDD8-204ENST00000526430 MYH9P35579 1960 aaKnown RBP12.29□□□□□ -0.44
NEDD8-204ENST00000526430 DCDC2BA2VCK2 349 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 DHX15O43143 795 aaKnown RBP12.29□□□□□ -0.44
NEDD8-204ENST00000526430 NONOQ15233 471 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEDD8-204ENST00000526430 FAM102BQ5T8I3 360 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 UTP14CQ5TAP6 766 aaKnown RBP12.29□□□□□ -0.44
NEDD8-204ENST00000526430 CCDC149Q6ZUS6 474 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 SLC24A5Q71RS6 500 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 KRT25Q7Z3Z0 450 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
NEDD8-204ENST00000526430 TBC1D17Q9HA65 648 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 ERAP1Q9NZ08 941 aa12.29□□□□□ -0.44
NEDD8-204ENST00000526430 RALYQ9UKM9 306 aaKnown RBP12.29□□□□□ -0.44
NEDD8-204ENST00000526430 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 C9IYK1 514 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 STK25O00506 426 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 TDP2O95551 362 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 RFX1P22670 979 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 TCF7P36402 384 aaPredicted RBP12.28□□□□□ -0.44
NEDD8-204ENST00000526430 RESTQ13127 1097 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 KCNT2Q6UVM3 1135 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 C4orf32Q8N8J7 132 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 ZNF558Q96NG5 402 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 CELF4Q9BZC1 486 aaKnown RBP12.28□□□□□ -0.44
NEDD8-204ENST00000526430 ELAC1Q9H777 363 aaKnown RBP12.28□□□□□ -0.44
NEDD8-204ENST00000526430 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 KCNH7Q9NS40 1196 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 TMEM161AQ9NX61 479 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 WDR81Q562E7 1941 aa12.28□□□□□ -0.44
NEDD8-204ENST00000526430 STX6O43752 255 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 NARSO43776 548 aaKnown RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 SLC37A4O43826 429 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 MGEA5O60502 916 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 CFHP08603 1231 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 KCNA2P16389 499 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 DMWDQ09019 674 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 ITGB3BPQ13352 177 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 TRIM29Q14134 588 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 Q4G0T1 1027 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 NIPA1Q7RTP0 329 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 GPR149Q86SP6 731 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 C12orf76Q8N812 135 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 GIMAP8Q8ND71 665 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 GJA10Q969M2 543 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 TMEM117Q9H0C3 514 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 AGO4Q9HCK5 861 aaKnown RBP12.27□□□□□ -0.45
NEDD8-204ENST00000526430 SPG21Q9NZD8 308 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 FBXO4Q9UKT5 387 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 SIT1Q9Y3P8 196 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 IRAK3Q9Y616 596 aa12.27□□□□□ -0.45
NEDD8-204ENST00000526430 SPEGQ15772 3267 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 DENND3A2RUS2 1198 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
NEDD8-204ENST00000526430 SRFP11831 508 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 TGM1P22735 817 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 NBR1Q14596 966 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 BMS1Q14692 1282 aaKnown RBP12.26□□□□□ -0.45
NEDD8-204ENST00000526430 PPM1JQ5JR12 505 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 B3GNT9Q6UX72 402 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 PLA2G4DQ86XP0 818 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
NEDD8-204ENST00000526430 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms