RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 H0YCG3 227 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 FAM13AO94988 1023 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 ZNF202O95125 648 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 GAP43P17677 238 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 NPTX2P47972 431 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 SMTNP53814 917 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 PEX3P56589 373 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 MBTD1Q05BQ5 628 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 FAM187BQ17R55 369 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 LONRF3Q496Y0 759 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 DEPTORQ8TB45 409 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 ZNF668Q96K58 619 aaPredicted RBP22.92■■□□□ 1.26
CD44-222ENST00000526025 PRIMPOLQ96LW4 560 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 ARHGAP28Q9P2N2 729 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 TTC3P53804 2025 aa22.92■■□□□ 1.26
CD44-222ENST00000526025 MAPTP10636 758 aaKnown RBP22.91■■□□□ 1.26
CD44-222ENST00000526025 ABCD1P33897 745 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 RAD51AP2Q09MP3 1159 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 SNW1Q13573 536 aaKnown RBP22.91■■□□□ 1.26
CD44-222ENST00000526025 KANK3Q6NY19 840 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 PPP4R3CPQ6ZMV5 832 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 KRBA2Q6ZNG9 492 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 TIGD1Q96MW7 591 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 MINDY3Q9H8M7 445 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 KMT5AQ9NQR1 393 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 CHST12Q9NRB3 414 aa22.91■■□□□ 1.26
CD44-222ENST00000526025 PTPRSQ13332 1948 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 AXLP30530 894 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 NFX1Q12986 1120 aaKnown RBP22.9■■□□□ 1.26
CD44-222ENST00000526025 CHRDL2Q6WN34 429 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 DYMQ7RTS9 669 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 TDHQ8IZJ6 230 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 PAGE5Q96GU1 130 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 CCDC113Q9H0I3 377 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 TSPYL2Q9H2G4 693 aaPredicted RBP22.9■■□□□ 1.26
CD44-222ENST00000526025 TMX1Q9H3N1 280 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 FZD8Q9H461 694 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 TMEM134Q9H6X4 195 aa22.9■■□□□ 1.26
CD44-222ENST00000526025 PRMT7Q9NVM4 692 aaPredicted RBP22.9■■□□□ 1.26
CD44-222ENST00000526025 ADGRA3Q8IWK6 1321 aa22.89■■□□□ 1.26
CD44-222ENST00000526025 GADD45BO75293 160 aaPredicted RBP22.89■■□□□ 1.25
CD44-222ENST00000526025 NCKAP1LP55160 1127 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 CACNB1Q02641 598 aaPredicted RBP22.89■■□□□ 1.25
CD44-222ENST00000526025 DSC3Q14574 896 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 MAPK6Q16659 721 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 TCTN1Q2MV58 587 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 OTOP2Q7RTS6 562 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 CATSPER4Q7RTX7 472 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 CCDC65Q8IXS2 484 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 ELOA2Q8IYF1 753 aaPredicted RBP22.89■■□□□ 1.25
CD44-222ENST00000526025 MYCT1Q8N699 235 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 CNNM3Q8NE01 707 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 ST6GALNAC4Q9H4F1 302 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 POLD4Q9HCU8 107 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 OLFML3Q9NRN5 406 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 AGPAT5Q9NUQ2 364 aa22.89■■□□□ 1.25
CD44-222ENST00000526025 PVALEFA0A1B0GWK0 134 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 CCDC169A6NNP5 214 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 SFI1A8K8P3 1242 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 GOLGA6L22H0YM25 854 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 INO80B-WBP1J3KQ70 363 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 PRPF40AO75400 957 aaKnown RBP22.88■■□□□ 1.25
CD44-222ENST00000526025 ERLIN2O94905 339 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 SHHQ15465 462 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 AMHR2Q16671 573 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 C9orf50Q5SZB4 431 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 TMEM161BQ8NDZ6 487 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 PHOSPHO2Q8TCD6 241 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 CCDC51Q96ER9 411 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 TRAIPQ9BWF2 469 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 C1orf112Q9NSG2 853 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 DACT1Q9NYF0 836 aa22.88■■□□□ 1.25
CD44-222ENST00000526025 GTPBP6O43824 516 aaPredicted RBP22.87■■□□□ 1.25
CD44-222ENST00000526025 TRAK2O60296 914 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 CSDE1O75534 798 aaKnown RBP22.87■■□□□ 1.25
CD44-222ENST00000526025 WDR5P61964 334 aaKnown RBP22.87■■□□□ 1.25
CD44-222ENST00000526025 NCBP1Q09161 790 aaKnown RBP22.87■■□□□ 1.25
CD44-222ENST00000526025 UNC13DQ70J99 1090 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 FAM178BQ8IXR5 827 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 STAMQ92783 540 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 RNPC3Q96LT9 517 aaKnown RBP22.87■■□□□ 1.25
CD44-222ENST00000526025 FIZ1Q96SL8 496 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 SLC9A7Q96T83 725 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 RGS18Q9NS28 235 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 PANK4Q9NVE7 773 aa22.87■■□□□ 1.25
CD44-222ENST00000526025 RNF216Q9NWF9 866 aaPredicted RBP22.87■■□□□ 1.25
CD44-222ENST00000526025 CNTNAP2Q9UHC6 1331 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 RANBP2P49792 3224 aaKnown RBP22.86■■□□□ 1.25
CD44-222ENST00000526025 K7ERI5 159 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 ACKR2O00590 384 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 SLC16A4O15374 487 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 TSPAN1O60635 241 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 IDEP14735 1019 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 ZSCAN20P17040 1043 aaPredicted RBP22.86■■□□□ 1.25
CD44-222ENST00000526025 AFMP43652 599 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 KCNJ6P48051 423 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 ASIC1P78348 528 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 ALCAMQ13740 583 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 LINC01599Q8WXQ3 324 aa22.86■■□□□ 1.25
CD44-222ENST00000526025 KIFC3Q9BVG8 833 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms