RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 GRM3Q14832 879 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 PHF19Q5T6S3 580 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 CD276Q5ZPR3 534 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 SLFN13Q68D06 897 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 ESRP1Q6NXG1 681 aaKnown RBP5.85□□□□□ -1.47
CSDE1-211ENST00000525970 USP51Q70EK9 711 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 PNMA8AQ86V59 439 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-211ENST00000525970 KBTBD2Q8IY47 623 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 TEKT5Q96M29 485 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 SLC12A5Q9H2X9 1139 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 SEMA4AQ9H3S1 761 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 DDX21Q9NR30 783 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSDE1-211ENST00000525970 MKS1Q9NXB0 559 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 ARHGAP28Q9P2N2 729 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 WASF3Q9UPY6 502 aa5.85□□□□□ -1.47
CSDE1-211ENST00000525970 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 ANO9A1A5B4 782 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 KLHL33A6NCF5 533 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 IFRD1O00458 451 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 HIP1RO75146 1068 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 KRT37O76014 449 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 PHKG2P15735 406 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 ACVRL1P37023 503 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 GLRBP48167 497 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 HMGA2P52926 109 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 MORC3Q14149 939 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 SEC23AQ15436 765 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 ZNF174Q15697 407 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 SKIDA1Q1XH10 827 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 C4orf46Q504U0 113 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 RRP12Q5JTH9 1297 aaKnown RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 CC2D1AQ6P1N0 951 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 PROSER1Q86XN7 944 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 Q8N1X5 172 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 IGDCC4Q8TDY8 1250 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 ZCCHC14Q8WYQ9 949 aaKnown RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 SCAND2PQ9GZW5 306 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 BARX1Q9HBU1 254 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 SLC39A2Q9NP94 309 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 DLL4Q9NR61 685 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 ZNF277Q9NRM2 450 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 CCM2LQ9NUG4 571 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 DDX20Q9UHI6 824 aaKnown RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 PTPN22Q9Y2R2 807 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 NOC2LQ9Y3T9 749 aaKnown RBP5.84□□□□□ -1.47
CSDE1-211ENST00000525970 MRFAP1Q9Y605 127 aa5.84□□□□□ -1.47
CSDE1-211ENST00000525970 LCHNA4D1U4 455 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 GOLGA8AA7E2F4 631 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 GOLGA8BA8MQT2 603 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 FZD7O75084 574 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 AKAP5P24588 427 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 PTX3P26022 381 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-211ENST00000525970 HTR3AP46098 478 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 SELENOPP49908 381 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 KIF11P52732 1056 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 DBPQ10586 325 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-211ENST00000525970 TMEM132BQ14DG7 1078 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 BRD3Q15059 726 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 FRMD7Q6ZUT3 714 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 CHST15Q7LFX5 561 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-211ENST00000525970 DTX3Q8N9I9 347 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 SLC35G2Q8TBE7 412 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 JADE3Q92613 823 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 C16orf92Q96LL3 132 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 VPS11Q9H270 941 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 DEF6Q9H4E7 631 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 JADE2Q9NQC1 790 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 ACSS2Q9NR19 701 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 KCNH7Q9NS40 1196 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 TOMM22Q9NS69 142 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 ARHGAP20Q9P2F6 1191 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 TCAF1Q9Y4C2 921 aa5.83□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF839A8K0R7 811 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 PATE3B3GLJ2 98 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 C4BPAP04003 597 aaKnown RBP5.82□□□□□ -1.48
CSDE1-211ENST00000525970 CHGBP05060 677 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 CYP17A1P05093 508 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 MTNR1BP49286 362 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 NFATC3Q12968 1075 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 EFCAB2Q5VUJ9 269 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 TRMT10BQ6PF06 316 aaKnown RBP5.82□□□□□ -1.48
CSDE1-211ENST00000525970 FAM43AQ8N2R8 423 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 SSH1Q8WYL5 1049 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 EVI5LQ96CN4 794 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 TAAR9Q96RI9 348 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 ARPC5LQ9BPX5 153 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF747Q9BV97 191 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 USP25Q9UHP3 1055 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 RCAN3Q9UKA8 241 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 ADAM29Q9UKF5 820 aa5.82□□□□□ -1.48
CSDE1-211ENST00000525970 APAF1O14727 1248 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 XPOTO43592 962 aaKnown RBP5.81□□□□□ -1.48
CSDE1-211ENST00000525970 KDM1AO60341 852 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 IL33O95760 270 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 AGXTP21549 392 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 CD40P25942 277 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 SDHAP31040 664 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 NEK3P51956 506 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 USP14P54578 494 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 DHX8Q14562 1220 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms