RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 OPHN1O60890 802 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 PRPF6O94906 941 aaKnown RBP6.21□□□□□ -1.42
CSDE1-210ENST00000525878 SDSP20132 328 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 ADRA1BP35368 520 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 CDCA2Q69YH5 1023 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-210ENST00000525878 KIAA1841Q6NSI8 718 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 APBB1IPQ7Z5R6 666 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-210ENST00000525878 ZNF276Q8N554 614 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 OSBPL2Q9H1P3 480 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 SYNPO2Q9UMS6 1093 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 FZD1Q9UP38 647 aa6.21□□□□□ -1.42
CSDE1-210ENST00000525878 CDK11AQ9UQ88 783 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-210ENST00000525878 RFPL3O75679 317 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 STC2O76061 302 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 NPEPPSP55786 919 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 MAN2A1Q16706 1144 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 MB21D1Q8N884 522 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 PGBD4Q96DM1 585 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 CRAMP1Q96RY5 1269 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 MYL10Q9BUA6 226 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 OXSMQ9NWU1 459 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 HS3ST4Q9Y661 456 aa6.2□□□□□ -1.42
CSDE1-210ENST00000525878 PCSK5Q92824 1860 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 MAFGO15525 162 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 PPFIA2O75334 1257 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 FSBPO95073 299 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 JMJD7P0C870 316 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 GAAP10253 952 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 METTL24Q5JXM2 366 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 MBNL2Q5VZF2 373 aaKnown RBP6.19□□□□□ -1.42
CSDE1-210ENST00000525878 TIGD7Q6NT04 549 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-210ENST00000525878 ZZZ3Q8IYH5 903 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 C7orf31Q8N865 590 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 ARL8AQ96BM9 186 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 POFUT1Q9H488 388 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 ZMAT4Q9H898 229 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 KANSL2Q9H9L4 492 aa6.19□□□□□ -1.42
CSDE1-210ENST00000525878 GCP02774 474 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 ITGB1P05556 798 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 GNAT2P19087 354 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 FLT3P36888 993 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
CSDE1-210ENST00000525878 UBE2R2Q712K3 238 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-210ENST00000525878 UNC5BQ8IZJ1 945 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 RTF1Q92541 710 aaKnown RBP6.18□□□□□ -1.42
CSDE1-210ENST00000525878 PDCD2LQ9BRP1 358 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 NCDNQ9UBB6 729 aa6.18□□□□□ -1.42
CSDE1-210ENST00000525878 PPP1R12AO14974 1030 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 ATP2A2P16615 1042 aaKnown RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 ZFP36P26651 326 aaKnown RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 NFE2L2Q16236 605 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 CFAP100Q494V2 611 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 LRRC55Q6ZSA7 311 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 CXorf67Q86X51 503 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 VRK3Q8IV63 474 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 PIK3C3Q8NEB9 887 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 HIST1H2AHQ96KK5 128 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 UIMC1Q96RL1 719 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 HIST1H2AJQ99878 128 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 NOL10Q9BSC4 688 aaKnown RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 INTS7Q9NVH2 962 aaKnown RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 ING3Q9NXR8 418 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 H2AFY2Q9P0M6 372 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-210ENST00000525878 COL4A3Q01955 1670 aa6.17□□□□□ -1.42
CSDE1-210ENST00000525878 GRID2IPA4D2P6 1211 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 FAM83GA6ND36 823 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 ELL2O00472 640 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-210ENST00000525878 TRIM24O15164 1050 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 PPFIA4O75335 1185 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 RHOBTB3O94955 611 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 CFBP00751 764 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 FSTL1Q12841 308 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 PABPC4Q13310 644 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSDE1-210ENST00000525878 LRRC32Q14392 662 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 FAM214AQ32MH5 1076 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 KIF18BQ86Y91 864 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 SYNE4Q8N205 404 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 GPR150Q8NGU9 434 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 TOMM22Q9NS69 142 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 TMEM260Q9NX78 707 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 MAGEC2Q9UBF1 373 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-210ENST00000525878 SORCS3Q9UPU3 1222 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 MYPNQ86TC9 1320 aa6.16□□□□□ -1.42
CSDE1-210ENST00000525878 NRP1O14786 923 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 ALDH1A2O94788 518 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 APOL3O95236 402 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 LMNAP02545 664 aaKnown RBP6.15□□□□□ -1.42
CSDE1-210ENST00000525878 HK1P19367 917 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 BMP5P22003 454 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 FBLP22087 321 aaKnown RBP6.15□□□□□ -1.42
CSDE1-210ENST00000525878 DSG1Q02413 1049 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 LY6G5CQ5SRR4 150 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 OR52N2Q8NGI0 321 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 PROKR1Q8TCW9 393 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 SH3TC2Q8TF17 1288 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.42
CSDE1-210ENST00000525878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms