RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 GINM1Q9NU53 330 aa4.14□□□□□ -1.75
CSDE1-209ENST00000525132 DDX20Q9UHI6 824 aaKnown RBP4.14□□□□□ -1.75
CSDE1-209ENST00000525132 GTF2IRD1Q9UHL9 959 aa4.14□□□□□ -1.75
CSDE1-209ENST00000525132 TBX21Q9UL17 535 aa4.14□□□□□ -1.75
CSDE1-209ENST00000525132 TMA7Q9Y2S6 64 aaKnown RBP4.14□□□□□ -1.75
CSDE1-209ENST00000525132 SNX11Q9Y5W9 270 aa4.14□□□□□ -1.75
CSDE1-209ENST00000525132 OTOFQ9HC10 1997 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 TGP01266 2768 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 TBC1D4O60343 1298 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 TBX10O75333 385 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 C6P13671 934 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 KLRK1P26718 216 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 CNGA1P29973 690 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 DNAJA1P31689 397 aaKnown RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 CCNFP41002 786 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 KIR3DL1P43629 444 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 GIPRP48546 466 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 TNNI2P48788 182 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 ZNF165P49910 485 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 YARSP54577 528 aaKnown RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 POU4F1Q01851 419 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 PRKCQQ04759 706 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 TNK2Q07912 1038 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 GAB4Q2WGN9 574 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 AASDHQ4L235 1098 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 STPG1Q5TH74 334 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 NLRC3Q7RTR2 1065 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 LSRQ86X29 649 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 ARRDC4Q8NCT1 418 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 BAHD1Q8TBE0 780 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 RNF141Q8WVD5 230 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 MISP3Q96FF7 219 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 BORCS6Q96GS4 357 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 SHDQ96IW2 340 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 CRAMP1Q96RY5 1269 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 PHF7Q9BWX1 381 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 CWC22Q9HCG8 908 aaKnown RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 SSU72Q9NP77 194 aaKnown RBP4.13□□□□□ -1.75
CSDE1-209ENST00000525132 PICK1Q9NRD5 415 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 VAV3Q9UKW4 847 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 SORCS3Q9UPU3 1222 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 RTTNQ86VV8 2226 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 LAMA1P25391 3075 aa4.13□□□□□ -1.75
CSDE1-209ENST00000525132 CENPEQ02224 2701 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 TSC2P49815 1807 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 PCSK5Q92824 1860 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 A0A087WV48 116 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 A0A087WZG4 1122 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 CLEC18AA5D8T8 446 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 SHOXO15266 292 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 LRP3O75074 770 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 FGRP09769 529 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 IMPDH2P12268 514 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 POLR2BP30876 1174 aaKnown RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 RBL2Q08999 1139 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 CCL14Q16627 93 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 TAF1BQ53T94 588 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 ARSHQ5FYA8 562 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 SPECC1Q5M775 1068 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 SFRP5Q5T4F7 317 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 ZNF746Q6NUN9 644 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 CLEC18BQ6UXF7 455 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 GK5Q6ZS86 529 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 THAP5Q7Z6K1 395 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 TMEM192Q8IY95 271 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 MFSD4AQ8N468 514 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 CLEC18CQ8NCF0 446 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 PIWIL2Q8TC59 973 aaKnown RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 RBM17Q96I25 401 aaKnown RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 SEC16BQ96JE7 1060 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 CCDC74BQ96LY2 380 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 KREMEN1Q96MU8 473 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 SLC9A7Q96T83 725 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 ASPNQ9BXN1 380 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 GPR62Q9BZJ7 368 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 DUSP15Q9H1R2 295 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 INCENPQ9NQS7 918 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 PCMTD2Q9NV79 361 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 ADGRE2Q9UHX3 823 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 PPT2Q9UMR5 302 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 OAS3Q9Y6K5 1087 aaKnown RBP4.12□□□□□ -1.75
CSDE1-209ENST00000525132 GRIN2DO15399 1336 aa4.12□□□□□ -1.75
CSDE1-209ENST00000525132 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 HYDINQ4G0P3 5121 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 LINC01565O15544 149 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 EYA4O95677 639 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 PHKG2P15735 406 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ATF4P18848 351 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 FUT4P22083 530 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 SP100P23497 879 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 CYP2C18P33260 490 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ETV3P41162 512 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ABCG1P45844 678 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 GP2P55259 537 aaKnown RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 RRP1P56182 461 aaKnown RBP4.11□□□□□ -1.75
CSDE1-209ENST00000525132 ARID5AQ03989 594 aa4.11□□□□□ -1.75
CSDE1-209ENST00000525132 MOGSQ13724 837 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms