RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	PIGO	Q8TEQ8	1089 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	NACC1	Q96RE7	527 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	RAB34	Q9BZG1	259 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	RNF19A	Q9NV58	838 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	HCST	Q9UBK5	93 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	LZTS1	Q9Y250	596 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	STK24	Q9Y6E0	443 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	ATG2A	Q2TAZ0	1938 aa		14.01	□□□□□ -0.17
RBBP4-215	ENST00000524393	USO1	O60763	962 aa	Known RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	ATF7	P17544	494 aa	Predicted RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	U2AF2	P26368	475 aa	Known RBP eCLIP	14	□□□□□ -0.17	1e-6	■□□□□ 8.6
RBBP4-215	ENST00000524393	AXL	P30530	894 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	ALDH7A1	P49419	539 aa	Known RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	NDUFV1	P49821	464 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	PLCB3	Q01970	1234 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	RNASEL	Q05823	741 aa	Known RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	POU5F1B	Q06416	359 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	CAMK1	Q14012	370 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	BMS1	Q14692	1282 aa	Known RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	MCTP1	Q6DN14	999 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	CATSPER3	Q86XQ3	398 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	CNNM3	Q8NE01	707 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	MCPH1	Q8NEM0	835 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	URGCP	Q8TCY9	931 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	MRPS27	Q92552	414 aa	Known RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	TMX3	Q96JJ7	454 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	POLR3C	Q9BUI4	534 aa	Predicted RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	XPNPEP1	Q9NQW7	623 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	ENTPD7	Q9NQZ7	604 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	SPG21	Q9NZD8	308 aa		14	□□□□□ -0.17
RBBP4-215	ENST00000524393	DBR1	Q9UK59	544 aa	Known RBP	14	□□□□□ -0.17
RBBP4-215	ENST00000524393	GRXCR2	A6NFK2	248 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393		H3BQV1	296 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	INO80B-WBP1	J3KQ70	363 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	LAD1	O00515	517 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	ZNF623	O75123	536 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	SRGAP2B	P0DMP2	458 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	MUT	P22033	750 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	RPA1	P27694	616 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	IRS1	P35568	1242 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	NRIP1	P48552	1158 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	CTC1	Q2NKJ3	1217 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	LONRF3	Q496Y0	759 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	NOTUM	Q6P988	496 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	LRRC55	Q6ZSA7	311 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	RBM23	Q86U06	439 aa	Known RBP	13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	LPP	Q93052	612 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	CDCA3	Q99618	268 aa	Predicted RBP	13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	TLE6	Q9H808	572 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	MINDY3	Q9H8M7	445 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	LRWD1	Q9UFC0	647 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	INPP5F	Q9Y2H2	1132 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	PCDHB2	Q9Y5E7	798 aa		13.99	□□□□□ -0.17
RBBP4-215	ENST00000524393	CNTNAP2	Q9UHC6	1331 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	ARHGEF35	A5YM69	484 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	MED24	O75448	989 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	SPATA31C1	P0DKV0	1188 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	IL9	P15248	144 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	SSTR3	P32745	418 aa	Predicted RBP	13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	CCT6A	P40227	531 aa	Known RBP	13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	FXR2	P51116	673 aa	Known RBP eCLIP	13.98	□□□□□ -0.17	3e-7	■■□□□ 12.1
RBBP4-215	ENST00000524393	PTEN	P60484	403 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	ADAM15	Q13444	863 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	CAPS	Q13938	189 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	NOMO2	Q5JPE7	1267 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	POTEG	Q6S5H5	508 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	ADGRD2	Q7Z7M1	963 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	HACE1	Q8IYU2	909 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	EFHB	Q8N7U6	833 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	CCDC51	Q96ER9	411 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	TMEM169	Q96HH4	297 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	TBC1D32	Q96NH3	1257 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	TCF25	Q9BQ70	676 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	NFKBIZ	Q9BYH8	718 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	TRIM6	Q9C030	488 aa	Predicted RBP	13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	NGRN	Q9NPE2	291 aa	Known RBP	13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	UBN1	Q9NPG3	1134 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	KANSL3	Q9P2N6	904 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	SMC3	Q9UQE7	1217 aa		13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.98	□□□□□ -0.17
RBBP4-215	ENST00000524393	LRRIQ4	A6NIV6	560 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	LINC01565	O15544	149 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	TSPAN1	O60635	241 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	GJB2	P29033	226 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	CA8	P35219	290 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	ARL2	P36404	184 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	LTBR	P36941	435 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	PBX3	P40426	434 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	BCAR1	P56945	870 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	ERVFC1	P60507	584 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	PTGDR	Q13258	359 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	PDIA5	Q14554	519 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	NBR1	Q14596	966 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	CLUL1	Q15846	466 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	RILPL1	Q5EBL4	403 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	PLPP4	Q5VZY2	271 aa		13.97	□□□□□ -0.17
RBBP4-215	ENST00000524393	MAEA	Q7L5Y9	396 aa		13.97	□□□□□ -0.17

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