RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CD320Q9NPF0 282 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 SH3D21A4FU49 640 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 KIF3BO15066 747 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 DTNBO60941 627 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 KLHL18O94889 574 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 COL6A1P12109 1028 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 GSPT1P15170 499 aaKnown RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 HSPA6P17066 643 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 AKAP5P24588 427 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 TXKP42681 527 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 ETV4P43268 484 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 KIAA2012Q0VF49 1180 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 USP10Q14694 798 aaKnown RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 GFOD2Q3B7J2 385 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 MINDY4Q4G0A6 757 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 ZMAT1Q5H9K5 638 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 FAM26FQ5R3K3 315 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 FAM102BQ5T8I3 360 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 TCEAL8Q8IYN2 117 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 KLHL36Q8N4N3 616 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 POU5F2Q8N7G0 328 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 TXNDC5Q8NBS9 432 aaKnown RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 CLIP3Q96DZ5 547 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 YTHDC1Q96MU7 727 aaKnown RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 RHOBTB2Q9BYZ6 727 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 PRDM12Q9H4Q4 367 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 GREM2Q9H772 168 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 EPB41L4AQ9HCS5 686 aaPredicted RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 EVLQ9UI08 416 aaPredicted RBP5.08□□□□□ -1.6
SKP1-212ENST00000523966 RCAN3Q9UKA8 241 aa5.08□□□□□ -1.6
SKP1-212ENST00000523966 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 PRAMEF4O60810 478 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 OFD1O75665 1012 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 RPLP2P05387 115 aaKnown RBP5.07□□□□□ -1.6
SKP1-212ENST00000523966 C5AR1P21730 350 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 RRADP55042 308 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 MALLQ13021 153 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 TCIRG1Q13488 830 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 GTF2H3Q13889 308 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 PCOLCEQ15113 449 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 ADRM1Q16186 407 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 VWA3BQ502W6 1294 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 IFIT1BQ5T764 474 aaKnown RBP5.07□□□□□ -1.6
SKP1-212ENST00000523966 NXNQ6DKJ4 435 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 LYSMD2Q8IV50 215 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 SLC41A1Q8IVJ1 513 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 TPH2Q8IWU9 490 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 LINC01356Q8N9X3 169 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 GLB1L3Q8NCI6 653 aaPredicted RBP5.07□□□□□ -1.6
SKP1-212ENST00000523966 ADAMTS17Q8TE56 1095 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 TSPEARQ8WU66 669 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 LPPQ93052 612 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 DACT3Q96B18 629 aaPredicted RBP5.07□□□□□ -1.6
SKP1-212ENST00000523966 AJUBAQ96IF1 538 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 C8orf48Q96LL4 319 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 LRGUKQ96M69 825 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 SPATA25Q9BR10 227 aa5.07□□□□□ -1.6
SKP1-212ENST00000523966 A0A1B0GTL3 188 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 FAM171A2A8MVW0 826 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 FFAR3O14843 346 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 AKR1B10O60218 316 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 PHF2O75151 1096 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 CELA3BP08861 270 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 LTA4HP09960 611 aaKnown RBP5.06□□□□□ -1.6
SKP1-212ENST00000523966 HNRNPLP14866 589 aaKnown RBP eCLIP5.06□□□□□ -1.68e-9■□□□□ 9.2
SKP1-212ENST00000523966 MRE11P49959 708 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 PER3P56645 1201 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 MEF2AQ02078 507 aaPredicted RBP5.06□□□□□ -1.6
SKP1-212ENST00000523966 CD69Q07108 199 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 ADAM15Q13444 863 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 NOMO1Q15155 1222 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 VMACQ2NL98 169 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 RRP12Q5JTH9 1297 aaKnown RBP5.06□□□□□ -1.6
SKP1-212ENST00000523966 KRT40Q6A162 431 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 PPP4R3AQ6IN85 833 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 BORAQ6PGQ7 559 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 MIGA2Q7L4E1 593 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 RALYLQ86SE5 291 aaKnown RBP5.06□□□□□ -1.6
SKP1-212ENST00000523966 UNC5BQ8IZJ1 945 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 ADGRG2Q8IZP9 1017 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 MAGEB6Q8N7X4 407 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 GPR156Q8NFN8 814 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 NRG4Q8WWG1 115 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 HDAC10Q969S8 669 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 RELTQ969Z4 430 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 TOX2Q96NM4 488 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 HAPLN2Q9GZV7 340 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 KATNBL1Q9H079 304 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 OR10A2Q9H208 303 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 NMRK2Q9NPI5 230 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 RBM12Q9NTZ6 932 aaKnown RBP5.06□□□□□ -1.6
SKP1-212ENST00000523966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.06□□□□□ -1.6
SKP1-212ENST00000523966 INTUQ9ULD6 942 aa5.06□□□□□ -1.6
SKP1-212ENST00000523966 RPTORQ8N122 1335 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 A0A0A6YYK5 440 aaPredicted RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 MROH6A6NGR9 719 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 PRC1O43663 620 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 AP1G1O43747 822 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms