RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 ZNF568Q3ZCX4 644 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 GAREM2Q75VX8 874 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 RAX2Q96IS3 184 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 HIST1H2AHQ96KK5 128 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 HIST1H2AJQ99878 128 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 C1QTNF3Q9BXJ4 246 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 KIAA1683Q9H0B3 1180 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 JADE2Q9NQC1 790 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
PCM1-219ENST00000523540 SYNPO2Q9UMS6 1093 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 EDARQ9UNE0 448 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 TNKSO95271 1327 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 FZD9O00144 591 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 B4GALT4O60513 344 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 SEC24DO94855 1032 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 MRPS9P82933 396 aaKnown RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 KRTAP1-1Q07627 177 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 PPARAQ07869 468 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 TBR1Q16650 682 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 TBC1D10BQ4KMP7 808 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 CCDC178Q5BJE1 867 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 AGBL4Q5VU57 503 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 ARHGEF18Q6ZSZ5 1173 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 RTKN2Q8IZC4 609 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 SLC16A11Q8NCK7 471 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 C1orf162Q8NEQ5 155 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 OR14C36Q8NHC7 312 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 SAMD11Q96NU1 681 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 FDXACB1Q9BRP7 624 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 SSBP3Q9BWW4 388 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 OSBPL6Q9BZF3 934 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 QRSL1Q9H0R6 528 aaKnown RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 SMPD4Q9NXE4 827 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 EVLQ9UI08 416 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 DNAI1Q9UI46 699 aa6.28□□□□□ -1.4
PCM1-219ENST00000523540 CTDP1Q9Y5B0 961 aaPredicted RBP6.28□□□□□ -1.4
PCM1-219ENST00000523540 CNOT4O95628 575 aaKnown RBP6.27□□□□□ -1.41
PCM1-219ENST00000523540 HNRNPLP14866 589 aaKnown RBP eCLIP6.27□□□□□ -1.41
PCM1-219ENST00000523540 MTNR1BP49286 362 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 MEOX1P50221 254 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 SRSF2Q01130 221 aaKnown RBP6.27□□□□□ -1.41
PCM1-219ENST00000523540 ADAM15Q13444 863 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 ABCB5Q2M3G0 1257 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 TOR2AQ5JU69 321 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 GFM2Q969S9 779 aaKnown RBP6.27□□□□□ -1.41
PCM1-219ENST00000523540 FUBP3Q96I24 572 aaKnown RBP eCLIP6.27□□□□□ -1.41
PCM1-219ENST00000523540 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 MEGF9Q9H1U4 602 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 OR10A2Q9H208 303 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 CDY2AQ9Y6F7 541 aa6.27□□□□□ -1.41
PCM1-219ENST00000523540 C2orf78A6NCI8 922 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 MT-CO1P00395 513 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 MYBL2P10244 700 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 RBP3P10745 1247 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 MUM1Q2TAK8 710 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 PGM2L1Q6PCE3 622 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 USP30Q70CQ3 517 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 CLEC14AQ86T13 490 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 TSPEARQ8WU66 669 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 SORCS2Q96PQ0 1159 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 DNAJC28Q9NX36 388 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 SRRDQ9UH36 339 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 DPP7Q9UHL4 492 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 SPEF1Q9Y4P9 236 aa6.26□□□□□ -1.41
PCM1-219ENST00000523540 SHTN1A0MZ66 631 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 ARHGAP6O43182 974 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA12O60330 932 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 NRP2O60462 931 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 CFBP00751 764 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 MTHFD2P13995 350 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 HGFACQ04756 655 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 CD69Q07108 199 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 SPIDRQ14159 915 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 MAN2A1Q16706 1144 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 AUTS2Q8WXX7 1259 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 PUS7Q96PZ0 661 aaKnown RBP6.25□□□□□ -1.41
PCM1-219ENST00000523540 SMAD5Q99717 465 aaKnown RBP6.25□□□□□ -1.41
PCM1-219ENST00000523540 ZNF277Q9NRM2 450 aaPredicted RBP6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA9Q9Y5G4 932 aaKnown RBP6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA8Q9Y5G5 932 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA7Q9Y5G6 932 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA6Q9Y5G7 932 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA3Q9Y5H0 932 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 PCDHGA2Q9Y5H1 932 aa6.25□□□□□ -1.41
PCM1-219ENST00000523540 A0A1W2PR48 441 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 OVOL3O00110 214 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 MATN2O00339 956 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 FSBPO95073 299 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 LY86O95711 162 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 GAAP10253 952 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 AGXTP21549 392 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
PCM1-219ENST00000523540 KRT85P78386 507 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 PCBP2Q15366 365 aaKnown RBP eCLIP6.24□□□□□ -1.41
PCM1-219ENST00000523540 AMOTL1Q8IY63 956 aa6.24□□□□□ -1.41
PCM1-219ENST00000523540 CFHR4Q92496 578 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms