RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PLS3P13797 630 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
PVT1-215ENST00000522963 IBSPP21815 317 aaPredicted RBP13.17□□□□□ -0.3
PVT1-215ENST00000522963 TMOD1P28289 359 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 RABGGTBP53611 331 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 EHHADHQ08426 723 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 MGAT3Q09327 533 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 IKBKEQ14164 716 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
PVT1-215ENST00000522963 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 NT5DC1Q5TFE4 455 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 RPAINQ86UA6 219 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 NME8Q8N427 588 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
PVT1-215ENST00000522963 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
PVT1-215ENST00000522963 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
PVT1-215ENST00000522963 PARVGQ9HBI0 331 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
PVT1-215ENST00000522963 GBF1Q92538 1859 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 RPLP2P05387 115 aaKnown RBP13.16□□□□□ -0.3
PVT1-215ENST00000522963 GAP43P17677 238 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 CD52P31358 61 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 PBX2P40425 430 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 NPTX2P47972 431 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 PEX3P56589 373 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 CAPSQ13938 189 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 LPIN1Q14693 890 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 KCNB1Q14721 858 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 ODR4Q5SWX8 454 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 RASIP1Q5U651 963 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 Q7L0L9 218 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 TMCO2Q7Z6W1 182 aaPredicted RBP13.16□□□□□ -0.3
PVT1-215ENST00000522963 RHPN2Q8IUC4 686 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 OSMRQ99650 979 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 CDHR5Q9HBB8 845 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
PVT1-215ENST00000522963 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 BIN1O00499 593 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 ASAP2O43150 1006 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 BAIAP3O94812 1187 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 RHOBTB3O94955 611 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 NLRP11P59045 1033 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 DEFB103AP81534 67 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
PVT1-215ENST00000522963 TSHZ1Q6ZSZ6 1077 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 MYOCDQ8IZQ8 938 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 SPIRE2Q8WWL2 714 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 NLRP4Q96MN2 994 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 KIFC3Q9BVG8 833 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 ADAMTS10Q9H324 1103 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 AGO3Q9H9G7 860 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 C17orf75Q9HAS0 396 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 LARSQ9P2J5 1176 aaKnown RBP13.15□□□□□ -0.3
PVT1-215ENST00000522963 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 ARID2Q68CP9 1835 aa13.15□□□□□ -0.3
PVT1-215ENST00000522963 ADGRA3Q8IWK6 1321 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 LRRIQ4A6NIV6 560 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 SLC16A4O15374 487 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 GPR32O75388 356 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 UPP2O95045 317 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 MYOGP15173 224 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 BMP6P22004 513 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 DNAJB2P25686 324 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 NMT1P30419 496 aaKnown RBP13.14□□□□□ -0.31
PVT1-215ENST00000522963 NAMPTP43490 491 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 GPC3P51654 580 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 NCKAP1LP55160 1127 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 STK4Q13043 487 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 PAK2Q13177 524 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms